Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2906 ATGGAGACTCCGGTTGTTAGATCGAGGGGGAGGCCACGGAAGAGAAGAAAAGAGGACGAACTAGAAGCGAAGTTAGGTTTGGAAGCGAAGAGGCAAGCCTTGGGGACGAGATCGATAGCTTTGGTTGGTCGATTCGTGCTGAAGGAGTTCCCGAGAAATGGTGTTTTTCTCGGGAAAGTTGTGTACTACGATTGTGGATTGTATAGAGTTACTTATGAGGATGGTGATTTTGAGGATTTGGATAGTGGCGAGGTTCGTGTGATTCTCCTTAATGACACTGATTTTGACGATGATTTGACTCGGAGGAAGGGAAAATTGGAGGAATTAGTGTCGCGGAGTAATGTTAAAGCTGTGAATAAATCGGAGAAGGGTTCTGATGAGAAAAATAAAGATGAACCGAAGGTTGATGCACCTGTTTCGAGTGAATTGAATGGTGTGAAAGGTGAGGAGCAAAATGAAGGGAGTGATGATTTGTCAAGTGACTATGATGGTTCTGATGGCGAGGTCATGCCACTGCCACAGATGCCACCACTTCCTCCGCCATTGCAGTTGCCCCCATCTTCAGGGAGTGTTGGTGTGCCGGAACAGTGTGTTTCGCTGCTGTTTTCTGTTTATGGGTTCCTTAGATCGTTCAGCACTAGGCTGTTCCTGTTCCCTTTTACTTTGGATGAGTTTGTTGGTTGTCTTAATTGCCGAGTTGCGAACAACTTGATCGATGCAATTCATGTTTCGCTAATGCGACCGTTGAGGAATCATCTTGAATCCCTTTCATTGGAGGGCTCAGAGCTTGCGTCGAAATGCCTTAGGTGCCATGATTGGAGCTTGATTGATGCATTGACTTGGCCTGTTTTTGTGATTCAGTATTTAGTAGTTAATGGACACACAAAAGGACCTGAATGGAAAGGGTTTTATGACGAGGTTTTTGCTGGCGAGTATTATTTATTGCCTGTAAGTAGGAAGTTAATGATATTGCAAATTCTCTGTGATGATGTGTTGGACTCGGAGGAGCTAAAAGCTGAAATGAACATGCGTGAAGAATCAGAGGTTGGGGTGGATTATGATGCAGAAGATATCCTTCCTGCAGAACCTGCGCCAAGAAGAGGCCGCCCAAGATCTGCCCAGACTTCTTTAGAGGATAAAGGAGCTATGAAATTGGTTTCAGCGTCAAATGCCGTGAACCAACCTGGTAACTCTTCTTTGAATATAGGAGGTACAGGAAACTCCGACAATGGTGATGATAGAAATGGAGATGATTGTCGCCTCTGTGGTATGGATGGGACCTTGCTTTGTTGCGATGGGTGTCCCTCTGCTTATCATTCAAGGTGTATTGGTGTGATGAAAATGCATATACCAGAAGGGCTGTGGTATTGTCCAGAGTGCAAAATTAATATGGCTGGGCCAACTATTGCAAAGGGAACATTACTTAGGGGGGCTGAAATATTTGGAACGGATTTGTATGGGCAACTGTTCATGGGTACTTGCGACCACTTACTGGTGCTCAATAGCAACAGCGATGAATTTTGTCTTAAATATTACAATCAGAATGACATTCCTAATGTTCTCCAAGTGCTTTATGGATCCCCGCAGCATAGACCAATATATTATGGTATTTGCACAGCACTGATGCAATATTGGAATATTCCTGGAAGCTTCTTGCCTCTCCCTCGTCCTTTGGATGAAGATGAACGTAAACCTGTTTGTTTAGTGAATGGAGAGTACTCTCAAAACACTGCGAATTTGATTCATAGTGATAATACAATGCCTTCTCTTGATGCTTCAACAGCTACCACTGAAAGTCATGCTCCTGAAAGCAGCAGCAATCCTAGTAGTAAAGAATGTGTCACCATGAATATGAAGCTTCCAGAGGAAACTAAAATGGAGTCAGTCATCTCAGCTGGTTCTGGTTTTGTTTCTGTTAGTCATCAGTCAGATGTGAACTGCCAAAGTTCTGCTAATAGGTCAATTCTGGTGGCTCCCACTACTTGCTCTTTGATAAACAGCCAATATAGTAACTATGGTCATGCAAATGATATGACATCACCTATGAATTTTTCTTTGCAAACCAAAGATAGCACCCGAGTTGGTTATGGAAAGTTTGAATCGGATAATAATGTTGTGTATATGGGTTTCTCCTATAAACCTCTGTCATACATTAATTATTATATGCATGGTGATTTTGCTGCATCAGCTGCTGCTAAATTGGCCCTTGTTTCGTCAGAGGAATCTAGGTTGGAGGCTCATGCGTCAGACAGTCAGAGGAAAACAATATCTGCAAACATTAATTTGCAAGCAAAAGCATTCTTGCTAACAGCTTCACGTTTCTTCTGGCCAGTTGCTGAAAAGAAGCTTGTGGAGGTTCCAAGAGAGAGGTGTGGCTGGTGCTTTTCTTGTAAAGCCCCTGTTTCAAGCAAGAGAGGATGCATGTTAAATCATGCTCTTATAAGTGCCACTAAAAGTGCTATGAAAACCCTTGCTGGTTTTTCTCCGGTACGGACTGGAGAGGGAATCCTTCCTAGCATTGCAACATACATTATATACATGGAGGAATGCTTACGTGGTTTAATAGTTGGGCCCTTCCTAAGTGCTAGCTACAGAAAGCAATGGCGTAAGCAAGTGGAACAGGCCACAACATATAGTGCTATCAAGCCGCTTTTACTTGAGCTTGAGGAGAACATTCGCATGATTGCTTTCTGTGGGGACTGGGTTAAGTTGATGGATGATTGGTTGGCTGAATTTTCCATCGTACAAAGTGCTGCACCTTCTCTTGGAACAGCTCAGAAGCGTGCACCGAGTGGGAGGCGTTACAAGAAGCGGTCAGCTAATGATGAAGTGACACCTGACGTTTGCCATGAAAGCTTTGAGTGGTGGCGCGGTGGCAAATTCACCAAACATATATTCCAAAAAGCAGTTTTGCCAAAATCCTTGGTCAGAAAAGCTGCTCGCCAAGGTGGTTTGAGGACAATTGCTGGTATTTCCTATGGGGATGGCTCTGAAATCCCTAAAAGAACCAGACAGTTCGTATGGAGAGTTGCAGTTCAAGCGAGTAGGACTGCATCACAGCTGGCACTTCAGGTCAGATATCTAGATTTTTATATAAGATGGAGTGATCTGATTCGTCCGGAGCAGAACATCCAGGATGTGAAAGGTCAAGAAACTGATGCTTCTACTTTCAGAAATGCAAATATTTGTGATAGAAAACTTATAGATGGAAAAAACTGCTATGGAGTAGCATTTGGGATCCAAAAGCATCTTTCTACTCGGGTAATGAAAAATGTTATTGAAATAGAGCAAGGTACAGAAGGACAAGAAAAATATTGGTTTTCTGAAACACGCATTCCTCTATATCTGGTAAAAGAGTATGAAGAAGGTAGTGGAAACATGCCATCTCTTGAAGAGCACTTTAACACTGCACCTCATCAGTTTCACAGTCGGCGGTTGCAAGCAATCCGCAAGGACATATTTTTTTACCTTATCTGCAAGAGAGACAATTTGGAGATGTTCTTGTGTTCAGTATGTCAGACGGGTGTTTTATTAAGGAATGCACTCAAGTGCAATGCATGTCAAGGTTTTTGTCATGAGGCTTGTTCCATAATTTCAACACTTTCTATTAATAAGAAAGTTGAGTACTTGATCACATGCAACCAATGTTACCATGCCAAGTTACTCGCTCAAAAAGAGACCAGTAATGAATCTCCAACGAGTCCCTTAGTCCTACAAGGGCGTGAAAATAGCTCTGGGACAGCCTTGAAGGGACCAAGGCCTAAAAGTTTTGATCAAACACAGAGATCGGCCAGGACAAAAGATGGTCGTCCTGACATAAAACAAGTTGCTTCTATGACTGTTTCAAAGGGAACAAAGGCTAAATGCAACAATCAAGCACTAACTACTCCGAGGTCAAAGGGTGGTGATTCTGATACCAAACAAGCCGCTTCTGGTTCCACCACGGCAGCTAAAAACCGTCGCAAGAATTGTTCTTGGGGTATTATATGGAGAAAGAAAAATGTTGATGATACAGGCATTGATTTCAGGCTCAAAAACATACTTTTACAGGGAGGCTCGGGCTTTCCTCAATTGGAACCTGTTTGTCACTTGTGCCGTAAGCCATACAGGTCTGATCTGATGTATATTCACTGTGAGACCTGCAAACATTGGTATCATGCTCAGGCTGTTGAACTCGAAGAGTCCAAAATTTTTGATGTATTGGGCTTCAAATGTTGCAAGTGTCGCAGGATCAAATCTCCCGAGTGTCCTTACTCTGATGTCAAACGTAAGACCCAAGAGGGCAAGAAGACAAGGGGGGGCTCAAAGAAAGAGTATTCTGGAGCAGATTCTGATTCTGGAACTTTTTCTGATATGAAAGAGTGCGAGCCTGCTACTCCAATCTTCCCTGTAGAGGACGATCCTCTGCTTTTCTCTCTTTCAAGTGTCGAGCTGGTTACAGAACCTAAGTCAGAGGATACCGAATGGAATAATCTCTCTGTGCCTGGGCCTCAAAAACTACCGGTGAGAAGACATGTTAAGCGTGAGGGGGATTACGACGGTTCTTTTGGAGGTAAACCATTGTATTCCGAATTTTCACAGAATGAAGCAGGTAATATGTGCAGACCTGGAGAGTTATCACCCTCGGACTATGACTCTGTAGTGCCCAATGACAGCAATCTGCTTAACGACCCTGAAAGTGTACAATTTGAATACGCGGACTTTGAACCCCATACCTACTTTTCGCTAACGGAACTGCTCCCAGATGATAGTAACCAGCTTGAGGGAGCTGATGCGTCCGGGGACTTGTCAGGATATTTGGGTACAGTTGTCCCTGAAGAATGTGGAGGTGTTAGTTTAGTCGATAATTCAGAACCGGCAGCATCCTTTCAAGACACTGTTTACAGTTGTTGGCAATGTTCACAAATGGAACCAGCCCCTGATCTCTGTTGCGAGGTTTGTGGCATTTTTATTCACAGCCAATGCTCACCTTGGGTTGAATCACCATCTAGGCTTGGAAGTTGGAGGTGTGGTAACTGCCGGGAATGGCAATAA 5034 0.435 METPVVRSRGRPRKRRKEDELEAKLGLEAKRQALGTRSIALVGRFVLKEFPRNGVFLGKVVYYDCGLYRVTYEDGDFEDLDSGEVRVILLNDTDFDDDLTRRKGKLEELVSRSNVKAVNKSEKGSDEKNKDEPKVDAPVSSELNGVKGEEQNEGSDDLSSDYDGSDGEVMPLPQMPPLPPPLQLPPSSGSVGVPEQCVSLLFSVYGFLRSFSTRLFLFPFTLDEFVGCLNCRVANNLIDAIHVSLMRPLRNHLESLSLEGSELASKCLRCHDWSLIDALTWPVFVIQYLVVNGHTKGPEWKGFYDEVFAGEYYLLPVSRKLMILQILCDDVLDSEELKAEMNMREESEVGVDYDAEDILPAEPAPRRGRPRSAQTSLEDKGAMKLVSASNAVNQPGNSSLNIGGTGNSDNGDDRNGDDCRLCGMDGTLLCCDGCPSAYHSRCIGVMKMHIPEGLWYCPECKINMAGPTIAKGTLLRGAEIFGTDLYGQLFMGTCDHLLVLNSNSDEFCLKYYNQNDIPNVLQVLYGSPQHRPIYYGICTALMQYWNIPGSFLPLPRPLDEDERKPVCLVNGEYSQNTANLIHSDNTMPSLDASTATTESHAPESSSNPSSKECVTMNMKLPEETKMESVISAGSGFVSVSHQSDVNCQSSANRSILVAPTTCSLINSQYSNYGHANDMTSPMNFSLQTKDSTRVGYGKFESDNNVVYMGFSYKPLSYINYYMHGDFAASAAAKLALVSSEESRLEAHASDSQRKTISANINLQAKAFLLTASRFFWPVAEKKLVEVPRERCGWCFSCKAPVSSKRGCMLNHALISATKSAMKTLAGFSPVRTGEGILPSIATYIIYMEECLRGLIVGPFLSASYRKQWRKQVEQATTYSAIKPLLLELEENIRMIAFCGDWVKLMDDWLAEFSIVQSAAPSLGTAQKRAPSGRRYKKRSANDEVTPDVCHESFEWWRGGKFTKHIFQKAVLPKSLVRKAARQGGLRTIAGISYGDGSEIPKRTRQFVWRVAVQASRTASQLALQVRYLDFYIRWSDLIRPEQNIQDVKGQETDASTFRNANICDRKLIDGKNCYGVAFGIQKHLSTRVMKNVIEIEQGTEGQEKYWFSETRIPLYLVKEYEEGSGNMPSLEEHFNTAPHQFHSRRLQAIRKDIFFYLICKRDNLEMFLCSVCQTGVLLRNALKCNACQGFCHEACSIISTLSINKKVEYLITCNQCYHAKLLAQKETSNESPTSPLVLQGRENSSGTALKGPRPKSFDQTQRSARTKDGRPDIKQVASMTVSKGTKAKCNNQALTTPRSKGGDSDTKQAASGSTTAAKNRRKNCSWGIIWRKKNVDDTGIDFRLKNILLQGGSGFPQLEPVCHLCRKPYRSDLMYIHCETCKHWYHAQAVELEESKIFDVLGFKCCKCRRIKSPECPYSDVKRKTQEGKKTRGGSKKEYSGADSDSGTFSDMKECEPATPIFPVEDDPLLFSLSSVELVTEPKSEDTEWNNLSVPGPQKLPVRRHVKREGDYDGSFGGKPLYSEFSQNEAGNMCRPGELSPSDYDSVVPNDSNLLNDPESVQFEYADFEPHTYFSLTELLPDDSNQLEGADASGDLSGYLGTVVPEECGGVSLVDNSEPAASFQDTVYSCWQCSQMEPAPDLCCEVCGIFIHSQCSPWVESPSRLGSWRCGNCREWQ* 1678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2906 1677 CDD PHD2_CHD_II 419 460 - -
Aev04g2906 1677 MobiDBLite consensus disorder prediction 582 612 - -
Aev04g2906 1677 SUPERFAMILY FYVE/PHD zinc finger 407 466 IPR011011 -
Aev04g2906 1677 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1352 1427 IPR013083 -
Aev04g2906 1677 SMART PHD_3 1629 1674 IPR001965 -
Aev04g2906 1677 SMART PHD_3 1168 1217 IPR001965 -
Aev04g2906 1677 SMART PHD_3 1361 1409 IPR001965 -
Aev04g2906 1677 SMART PHD_3 418 461 IPR001965 -
Aev04g2906 1677 PANTHER PHD FINGER FAMILY PROTEIN 1 1674 - -
Aev04g2906 1677 ProSiteProfiles Zinc finger PHD-type profile. 416 463 IPR019787 -
Aev04g2906 1677 MobiDBLite consensus disorder prediction 1420 1450 - -
Aev04g2906 1677 MobiDBLite consensus disorder prediction 344 378 - -
Aev04g2906 1677 MobiDBLite consensus disorder prediction 172 187 - -
Aev04g2906 1677 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 1175 1206 IPR017896 -
Aev04g2906 1677 ProSiteProfiles DDT domain profile. 195 255 IPR018501 -
Aev04g2906 1677 MobiDBLite consensus disorder prediction 1278 1318 - -
Aev04g2906 1677 SMART testlast3 195 255 IPR018501 -
Aev04g2906 1677 CDD PHD_SF 1629 1673 - -
Aev04g2906 1677 Pfam PHD-finger 419 461 IPR019787 -
Aev04g2906 1677 ProSitePatterns Zinc finger PHD-type signature. 419 460 IPR019786 -
Aev04g2906 1677 MobiDBLite consensus disorder prediction 1420 1439 - -
Aev04g2906 1677 MobiDBLite consensus disorder prediction 119 137 - -
Aev04g2906 1677 Pfam DDT domain 196 251 IPR018501 -
Aev04g2906 1677 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 406 478 IPR013083 -
Aev04g2906 1677 SUPERFAMILY FYVE/PHD zinc finger 1356 1414 IPR011011 -
Aev04g2906 1677 MobiDBLite consensus disorder prediction 1228 1318 - -
Aev04g2906 1677 MobiDBLite consensus disorder prediction 1228 1259 - -
Aev04g2906 1677 PANTHER DNA-BINDING AND ZINC-FINGER PROTEIN 1 1674 - -
Aev04g2906 1677 MobiDBLite consensus disorder prediction 115 189 - -
Aev04g2906 1677 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 310 342 IPR028942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2906 Aev-Chr4 28837552 28845548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2906 285 561 EF-hand Containing Proteins AT5G22760 48.944 1.77e-73 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Aev04g2906 DDT 8.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2906 - - ahf:112736410 2486.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2906 04 28837552 28845548 Aev04g2906 04 28837552 28845548 ECH