Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev04g2899 | ATGGCAAAAATCAGTACCCTCAAATCTTCTTCCAAATCAAGTAATTCCAAGAACCGCTACGTAGGAATATGGTACAAAAATATCCCAAAGAGAACTGTCGTATGGGTTGCCAACCGTGATCGTCCGATCACGGATGACAACTCAAGTACACTCTCCATAAGCCGAGAAGGAAATCTTGTTTGGTCAACAAACTCGAGTTCGAATCCGAGAAGTGGACCTTGGAATGGTATTAGATTTAGTGGTGCACCATTACAAGGAACTTCTACAATTGCTGAACAAATTCTTGTGAATGAAGAAGATGAAGTTTCATACATGTACATACTTAAGAACAAGGCCATGATTTCAATCATTGTTCTAAACCAAACACTTTGGATTCGAAGAAGGTTCAATTGGGTACCAGAAAACAGAACATGGGAGCTTTATCAATCTGTTCCAAGAGACAATTGTGATACTTATAATCCATGTGGGTCTTATGGAAATTGTGATGTTAATGTTTCACCAATTTGCCATTGTTTGGAAGGGTTCGACCCGAAATTACCAAGGAATTGGAATACAATTATGGACTGGAAACAAGGTTGTGTGCGTCGAGAACCGTGGAGGTGTGAGATCAAAAACAAAAACAGAGTTGGTTTTCATAGATTTCGTAGCATGAAGTTGCCTGATACTAGTGATTTTTGGTTTGATCAAAGTATGGAACTTGAGGATTGTAAGGCAAAATGCATGGAGAATTGTTCTTGTACGGCTTATGCTAACTTGGATGTGAGGGGTGATGGTAGTGGCTGTGCTATTTGGTTTGGTGATCTTGTTGATTTGAGGGTTACTGAAGGGGGACAAGATCTTTATGTTCGAATGGTTACTCCATCAACAGATGCTAAACCCAGGAAGATGAAGAAGAAGATAGCAGTCTTGGTAACTACAATCACAATTCCAATAGTCCTTATGTTACTTCTTGTATTCTCCTACACTTACCGGACCCAAAGAAAGTTTCAAGAAAATACAGAGGAAATTATGTTAGCAGAAAATAAAGAGGCAAGTGGACAAGAAGATTTTGAGCTTCCAATCTTTGACCTTGAAACAATAGTTAAGGCCACTAATGACTTCTCAATTGACAATAAGCTTGGGCAAGGTGGATTTGGACCCGTATATAAGGGTATACTTGCAAATGGACAAGAAATTGCTGTCAAGAGACTTTCAAAGGATTTTGGACAAGGATTGAATGAATTCAAGAATGAAGTAATATTGTGTGCCAAACTTCAACACCGGAATCTTGTTAGGGTTCTTGGATGTTGCATTCAAGGAGAGAAAAAAATGTTAGTCTATGAATATATGCCTCATAGAAGCCTAGATTCTTTTCTTTTTGATTCAGCTCAAAGTAAGGTTTTGGATTGGCCTAAGCGTTTTCAAATTATATGCGCAATTGCTCGGGGGCTTCTTTATCTTCATCAAGATTCTAGACTTAGGATTATTCATAGAGATCTAAAAGCAAGCAATATTTTATTAGACAACAATATGAATGCAAAAATTTCGGATTTCGGTTTGGCAAGAATGTGTAGAGGTGATCAAGATGAAGAAAGTACCCATACGGTAGTTGGAACATA | 1598 | 0.3811 | MAKISTLKSSSKSSNSKNRYVGIWYKNIPKRTVVWVANRDRPITDDNSSTLSISREGNLVWSTNSSSNPRSGPWNGIRFSGAPLQGTSTIAEQILVNEEDEVSYMYILKNKAMISIIVLNQTLWIRRRFNWVPENRTWELYQSVPRDNCDTYNPCGSYGNCDVNVSPICHCLEGFDPKLPRNWNTIMDWKQGCVRREPWRCEIKNKNRVGFHRFRSMKLPDTSDFWFDQSMELEDCKAKCMENCSCTAYANLDVRGDGSGCAIWFGDLVDLRVTEGGQDLYVRMVTPSTDAKPRKMKKKIAVLVTTITIPIVLMLLLVFSYTYRTQRKFQENTEEIMLAENKEASGQEDFELPIFDLETIVKATNDFSIDNKLGQGGFGPVYKGILANGQEIAVKRLSKDFGQGLNEFKNEVILCAKLQHRNLVRVLGCCIQGEKKMLVYEYMPHRSLDSFLFDSAQSKVLDWPKRFQIICAIARGLLYLHQDSRLRIIHRDLKASNILLDNNMNAKISDFGLARMCRGDQDEESTHTVVGT | 532 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev04g2899 | 532 | SUPERFAMILY | Protein kinase-like (PK-like) | 350 | 532 | IPR011009 | - | |
| Aev04g2899 | 532 | PANTHER | CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN | 54 | 532 | - | - | |
| Aev04g2899 | 532 | CDD | PAN_AP_plant | 201 | 283 | - | - | |
| Aev04g2899 | 532 | Pfam | PAN-like domain | 206 | 271 | IPR003609 | - | |
| Aev04g2899 | 532 | Gene3D | Phosphorylase Kinase; domain 1 | 325 | 442 | - | - | |
| Aev04g2899 | 532 | SMART | serkin_6 | 367 | 530 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Aev04g2899 | 532 | ProSiteProfiles | Bulb-type lectin domain profile. | 1 | 121 | IPR001480 | - | |
| Aev04g2899 | 532 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 54 | 532 | - | - | |
| Aev04g2899 | 532 | Gene3D | Transferase(Phosphotransferase) domain 1 | 443 | 532 | - | - | |
| Aev04g2899 | 532 | ProSiteProfiles | PAN/Apple domain profile. | 201 | 285 | IPR003609 | - | |
| Aev04g2899 | 532 | Pfam | S-locus glycoprotein domain | 70 | 178 | IPR000858 | GO:0048544 | |
| Aev04g2899 | 532 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 13 | 61 | - | - | |
| Aev04g2899 | 532 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 488 | 500 | IPR008271 | GO:0004672|GO:0006468 | |
| Aev04g2899 | 532 | Pfam | D-mannose binding lectin | 32 | 66 | IPR001480 | - | |
| Aev04g2899 | 532 | SMART | ntp_6 | 206 | 284 | IPR003609 | - | |
| Aev04g2899 | 532 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 18 | 68 | IPR036426 | - | |
| Aev04g2899 | 532 | ProSiteProfiles | Protein kinase domain profile. | 367 | 532 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Aev04g2899 | 532 | ProSiteProfiles | EGF-like domain profile. | 145 | 181 | IPR000742 | - | |
| Aev04g2899 | 532 | Pfam | Protein tyrosine and serine/threonine kinase | 368 | 524 | IPR001245 | GO:0004672|GO:0006468 | |
| Aev04g2899 | 532 | PANTHER | CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN | 13 | 61 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aev04g2899 | Aev-Chr4 | 28784302 | 28787237 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aev04g2899 | 302 | 532 | Receptor kinase-like Gene Family | AT4G23230 | 56.034 | 1.55e-74 | 246 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | RLK-Pelle_DLSV | Aev04g2899 | PK_Tyr_Ser-Thr | 1.5e-35 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev04g2899 | - | - | gmx:100790436 | 646.736 |