Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2895 ATGGAGTTCTGGGGTGTTGAGGTTAAGCCTGGACAGGCTGTTAAAGTAGATGAAATGGAAATGGGAGGATTAATTCACATTTCTCAGGTTGCCCTAGGCGAGGCGTCGAAGAAGGACAAATCAAGTGAACCTGCAGTTGTGTACTTGAAAGTTGGCGAGCAGAAGCTTGTTTTGGGAACTCTTATTAGGGATGACATTCCTCATCTTTCCATGGATATTGTTCTTGACAAGGAGTTTGAGCTCTCTCACACTTCGAAGAATGCCAGCATTTATTTTATTGGATACATTCTTTGTCGCACTAGTGATGATATGCCTTTTGATGATTCTGAGGACTACACTGAGAGCGATGAAGATGTTGCATTGACTGGCCAAGATAATGGAAAACCTGAAGCAAAAACTGAAAAACCAAAGGTTACTGAAGCTAAGAAAGCAGCTGCTGGCACTTCAGCTAAACAAGTCAAAATTGCTGACCCAAAGAAAGTTGAAGAGGATGATGATTCTGAAGATGAATCTGATGATGATGATGAAGATGATGAATCTGGAAGTCTTGATGAGATGGATGCTGATAGTGATGAGGAGGATGATAGTGATGATGACGAAGACGATGAGGAGACACCCGTCAAAAAGGTGGATCAGGGCAAGAAGAGACCCAATGAGTCTGCATCAAAAACCCCAGTTTCTGCAAAGAAAGCGAAAACTGCTACTCCAGAGAAGACTGATGGCAAGAAAAACGCACATACCGCAACTCCTCACCCAATGAAGAAGGGTGCAAAGACTCCCAACAGCGCGGCAAAGGGCCAGTCACCCAGTTCTGGTGGGCATCTGTCTTGCAAAAGCTGCAGCAAGACTTTCAACAACGAAAGTGGTCTGCAACAGCATAAGAAGGCCAAGCATGGTGGTCAGTAA 906 0.4437 MEFWGVEVKPGQAVKVDEMEMGGLIHISQVALGEASKKDKSSEPAVVYLKVGEQKLVLGTLIRDDIPHLSMDIVLDKEFELSHTSKNASIYFIGYILCRTSDDMPFDDSEDYTESDEDVALTGQDNGKPEAKTEKPKVTEAKKAAAGTSAKQVKIADPKKVEEDDDSEDESDDDDEDDESGSLDEMDADSDEEDDSDDDEDDEETPVKKVDQGKKRPNESASKTPVSAKKAKTATPEKTDGKKNAHTATPHPMKKGAKTPNSAAKGQSPSSGGHLSCKSCSKTFNNESGLQQHKKAKHGGQ* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2895 301 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 297 - -
Aev04g2895 301 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 297 - -
Aev04g2895 301 MobiDBLite consensus disorder prediction 162 205 - -
Aev04g2895 301 Pfam Nucleoplasmin-like domain 3 96 IPR041232 -
Aev04g2895 301 Gene3D Nucleoplasmin core domain 1 101 - -
Aev04g2895 301 MobiDBLite consensus disorder prediction 107 301 - -
Aev04g2895 301 ProSitePatterns Zinc finger C2H2 type domain signature. 277 298 IPR013087 -
Aev04g2895 301 MobiDBLite consensus disorder prediction 261 290 - -
Aev04g2895 301 ProSiteProfiles Zinc finger C2H2 type domain profile. 275 301 IPR013087 -
Aev04g2895 301 SMART c2h2final6 275 298 IPR013087 -
Aev04g2895 301 MobiDBLite consensus disorder prediction 233 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2895 Aev-Chr4 28745421 28747949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2895 1 298 C2H2 Transcription Factor Family AT5G03740 38.994 6.26e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev04g2895 NPL 1.2e-11 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2895 - - gmx:547649 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2895 04 28745421 28747949 Aev04g2895 04 28745421 28747949 ECH