Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2886 ATGGATAACAGTGACACTGTAACTTCAAACCTTAACGCTACAACAATGAAGAAGCCGAAGGTTGTCGTGATTACGGGTCCCACAGCCTCCGGCAAGTCGAAGCTCGCCGTTGATTTGGCCTCACACTTCCCAATCGAAATCATCAACGCCGATTCCATGCAGGTCTACCGTGGTCTCGATGTTCTCACCAACAAAGTTCCTCACCCCCAACAAAACGGAGTGCCGCACCATCTTTTGGGTACCGTTAGCCCTAACGTTGAATTCACAGCTAAAGCGTTTCGGGATTCTGCTATTCCCATCATAGATGGGATATTGGCTCGTAATCACTTGCCTGTTATAGTTGGGGGCACAAATTACTATATCCAGGCTCTTGTGAGTCCGTTTCTTCTAGATGATTCAGCAGAGGATATGGATGAATGCGGGTTAGGTGATGCACCTGGTACCACACAGTCTGCTAACAGTTTCCTTGCTGAAGATGACAGTTCAAATGATAGTTATGACCTTCTTAAAGATATCGATCCAGTTGCTGCAAATAGAATCCATCCAAATAACCATAGAAAGATCAAACAATATATTAGTTTGTATGCACGCACTGGTGTTCTTCCTAGCAAAATTTTTCAAGGAAAGGCAGCAGAGAAATGGGGTCAAGTTGATAACTTAAGATATGATTGCTGTTTCATATGTGTGGATGCATCTCTTCCTGTACTGGACAGATATGTTGAGCAGAGGGTAGATTGCATGATGGATACTGGATTACTCAATGAAGTCTATGACATTTACAATCTGAATGCAGATTATACTAGAGGTTTGCGGCAGGCTATTGGTGTCCGTGAATTTGAGACTCTTCTCAGAACCTCTTTTGTTGAAAACATCTATAAAAGAGAGAAGGAATTAACTGAGGGGTCCAGCATAGAAAAGGGTGTGAAATTGTTTGATGGTAATCTGATGGAGTGGTTGAAATCTTCCTCTGATACTGAAAGCATAGTTCTTCTGAAAGAAGCAATTGAAAAAGTAAAAATTAATACACGGAGACTTGTTCGACGTCAGAAAAGGATGCTCAGTCGACTGCAAACACTGTTTGGTTGGAACATACATTACGTTGATTCCACAGAATCAATATCAAGCAAATCAGACGATGTATGGACCGAACAAGTGGTTAAATCTGCCGTGAAGATATTTAGTTCCTTCCTGCGTGAGAATGGAAGCTTCTCATCCACATGTGGGATGCCAAATGACACTGGGATGAAAATAATCCAAAGGGATCTCTGGACCCAATACATATGCAAGGCCTGTGGAGACAGGGTGCTTAGAGGATTGCATGAATGGGAGCAACACAAACAAGGTCGCGGGCACAGGAAACGTATTTCTAGTCGCGGGCACAGGAAACGTATTTCTAGTCTCAAGAGCAAAGGACAAGATGTTAGTAACTTGGAGCAAAAGCTGGAATACTCACTCTGA 1458 0.4287 MDNSDTVTSNLNATTMKKPKVVVITGPTASGKSKLAVDLASHFPIEIINADSMQVYRGLDVLTNKVPHPQQNGVPHHLLGTVSPNVEFTAKAFRDSAIPIIDGILARNHLPVIVGGTNYYIQALVSPFLLDDSAEDMDECGLGDAPGTTQSANSFLAEDDSSNDSYDLLKDIDPVAANRIHPNNHRKIKQYISLYARTGVLPSKIFQGKAAEKWGQVDNLRYDCCFICVDASLPVLDRYVEQRVDCMMDTGLLNEVYDIYNLNADYTRGLRQAIGVREFETLLRTSFVENIYKREKELTEGSSIEKGVKLFDGNLMEWLKSSSDTESIVLLKEAIEKVKINTRRLVRRQKRMLSRLQTLFGWNIHYVDSTESISSKSDDVWTEQVVKSAVKIFSSFLRENGSFSSTCGMPNDTGMKIIQRDLWTQYICKACGDRVLRGLHEWEQHKQGRGHRKRISSRGHRKRISSLKSKGQDVSNLEQKLEYSL* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2886 485 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 17 399 - -
Aev04g2886 485 Gene3D Classic Zinc Finger 421 473 - -
Aev04g2886 485 TIGRFAM miaA: tRNA dimethylallyltransferase 21 284 IPR018022 GO:0008033
Aev04g2886 485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 264 IPR027417 -
Aev04g2886 485 MobiDBLite consensus disorder prediction 449 465 - -
Aev04g2886 485 Hamap tRNA dimethylallyltransferase [miaA]. 21 374 IPR018022 GO:0008033
Aev04g2886 485 MobiDBLite consensus disorder prediction 447 473 - -
Aev04g2886 485 Gene3D - 19 417 IPR027417 -
Aev04g2886 485 Gene3D - 148 209 - -
Aev04g2886 485 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 17 399 IPR039657 -
Aev04g2886 485 Pfam IPP transferase 54 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2886 Aev-Chr4 28646830 28650958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2886 24 456 C2H2 Transcription Factor Family AT2G27760 59.080 1.32e-176 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2886 K00791 - gmx:100792690 743.806