Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2878 ATGAGGACACTGTGCAGCAATGTAATGAACCTCACGAATTTACGATTTTGCCACTCTTCTCAAATCCTCCTCTTCTCACCAAACCCCACATTTCTCCTTCCTTCCTTCTCCTCTCGATTTTCAAACTTCACTCTCAAAATCTCAAAAGCTTCTTCTCCTTCAATTCCTTTCAATTCTCCTACGGTGATTCGAGCTGCATCAATGGCTTCTTCTTCTTCTTCTCCTTCGTCATCGACGGAGACAAAGCCATTCTCTGTTCTGTTTGTGTGCCTTGGGAACATATGCAGGAGCCCAGCTGCAGAAGGGGTATTCACTGACTTGGTTAAGAAAAGGGGTTTCGAAAACAAGTTCAAAATCGATTCTTGTGGCACCATCAATTACCACGAGGGGAATGAAGCAGACCTGAGAATGAGAGCAGCGTCAAAGAGGCGAGGGGTTCAGATAACTTCTATTTCTAGGCCGCTCAAGCCATCCGATTTCATTGACTTTGATCTGATTCTTGCCATGGACTTGCAAAACAGAGTGGACATATTGGAGGCTTTTGATAGTTGGAAAAACAGATATAATTTACCGGATGATGCTCATAAGAAGGTTAAGTTGATGTGTTCATATTGTAAGAAGCATGATGAAACTGAAGTCCCGGATCCTTACTATGGTGGACCACAAGGGTTTGAGAAGGTGTTAGATTTGCTTGAAGATGCTTGTGGATCATTGCTGGAAAACATTGTGGCTGAAAACAAACATGTACAAGAATCCTAA 759 0.4269 MRTLCSNVMNLTNLRFCHSSQILLFSPNPTFLLPSFSSRFSNFTLKISKASSPSIPFNSPTVIRAASMASSSSSPSSSTETKPFSVLFVCLGNICRSPAAEGVFTDLVKKRGFENKFKIDSCGTINYHEGNEADLRMRAASKRRGVQITSISRPLKPSDFIDFDLILAMDLQNRVDILEAFDSWKNRYNLPDDAHKKVKLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACGSLLENIVAENKHVQES* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2878 252 SUPERFAMILY Phosphotyrosine protein phosphatases I 82 242 IPR036196 -
Aev04g2878 252 Pfam Low molecular weight phosphotyrosine protein phosphatase 86 239 IPR023485 -
Aev04g2878 252 Gene3D - 66 247 - -
Aev04g2878 252 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 10 247 - -
Aev04g2878 252 CDD LMWPTP 85 240 - -
Aev04g2878 252 PRINTS LMW phosphotyrosine protein phosphatase signature 86 103 IPR017867 GO:0004725|GO:0006470
Aev04g2878 252 PRINTS LMW phosphotyrosine protein phosphatase signature 213 228 IPR017867 GO:0004725|GO:0006470
Aev04g2878 252 PRINTS LMW phosphotyrosine protein phosphatase signature 129 145 IPR017867 GO:0004725|GO:0006470
Aev04g2878 252 SMART LMWPc_2 84 241 IPR023485 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2878 65 246 Protein tyrosine phosphatase (PTP) family AT3G44620 62.927 1.78e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2878 K25307 - gmx:100797254 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2878 04 28567897 28570662 Aev04g2878 04 28567897 28570662 ECH