Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2876 ATGAACGGCGATGGCCGGAGACGCGACCGGTGGGACAACACCAGAAGATCCAAGAAGCAGAAGCAGATCCGCAACGCCGAGGAAGAGCTCGAAGCGAAGTTAGGGTTCGATCTCTTCTCCGAGGGCGAAAAGCGACTCGGATGGTTGCTCAATTTCGCATCCTCATCTTATGAGGATGAAGAAACCCGCAAAGTTTACAGTTGCGTCGATCTTTACTTTGTTACACAGGATGGGTCTTCATTCAAGACTAAATACAGATTTCGCCCTTATTTCTATGCAGCTACTAAGGATAAAATGGAGATGGATGTCGAAGCATACCTGAGGCGGCGTTATGAAGCTCAGATTGCAGATATTGAAATTATAGAAAGAGAAGATTTGGATCTTAAAAATCATTTGTCTGGCTTAAGAAAATCTTATTTAAAGCTATCATTTGATACCGTTCAACAATTGATGAATGTGAAGAGTGACTTGATGCATGTCGTTGAAAGGAATAAGGCAAAATCTGATGCTGCAGAAGCCTATGAGTCCATATTGAGTGGAAGAAGAGAACAAAAACCTCAAGACTTTATAGATTGTATCATTGATCTTCGTGAATATGATGTGCCTTATCATGTTCGCTTTGCCATTGACAATGATATACGGTCTGGCCAGTGGTATAATGTTGCCGTATCCAACACTGGGGTCACACTTGAGAAGAGGACAGATCTTCTACAGCGTGCTGAAGTTCGTATTTGTGCATTTGATATTGAGACCACAAAACTTCCACTAAAATTTCCTGACGCTGATTATGATTTAATTATGATGATTTCATACATGATAGATGGACAGGGGTATTTAATCATAAATAGAGAGTGTGTCGGCGAAGATATTGAGGATTTAGAGTACACTCCAAAACCAGAGTTCGAAGGTTGTTTCAAGGTCACAAATGTTCAAACTGAGGTTGAGCTTCTTAGATTATGGTTTTCTCATATGCAAGAGGTGAAACCTGGTATCTATGTGACGTATAACGGTGACTTTTTCGATTGGCCATTCCTGGAAAAAAGGGCAGCCCATCATGGGTTCAAAATGAGTGATGAATTGGGTTTTCAGTGCGACAAGAATCAAGGAGAATGCCGTGCTAAATTTGCTTGCCATTTAGATTGTTTTGCTTGGGTTAAACGTGATAGTTATCTCCCTCAGGGAAGCCAAGGCCTAAAGGCTGTTACAAAAGCAAAGTTGGGTTATGATCCATTGGAGGTAAACCCTGAGGACATGGTTCGCTTTGCAAAGGAAAAACCTCAGATGATGGCTTCATATTCTGTTTCTGATGCAGTGGCAACTTATTACTTGTATACAACTTATGTTCATCCGTTTATTTTCTCTCTTGCAACTATTATACCCATGTCACCAGATGAGGTTTTGCGCAAAGGTAGTGGGACCCTCTGTGAGATGTTGCTTATGGTCCAGGCATATAAAGCAAATGTTGTCTGCCCTAACAAACACCAATCTGATCCAGAGAAGTTTTATAACAATCATCTTCTTGAGAGTGAGACATACATAGGTGGCCATGTGGAATGCCTAGAAAGTGGTGTTTTTAGATCTGATATTCCAACTAGTTTTACGCTCGAGCCATCTGCCTATGAGCAATTGATCAACAACCTTGATCGGGATCTACAGTATGCTATAAGAGTAGAGGGTAAGATGGATTTGGAAACCGTGTCTAATTATGATGAAGTGAAGAATGCTATCATGGAAAAGCTTGTAAAATTACGAGATGTTCCAATACGTGAAGAATGTCCCCTCATTTATCATCTGGATGTAGCTGCCATGTATCCAAACATAATTTTAACAAATCGGCTTCAGCCACCGTCGATTGTTACAGATGAGGTTTGCACTGCATGCGATTTTAATCGTCCTGGAAAGACTTGTCTACGCAAACTTGAGTGGGTTTGGCGAGGAGAAACATTCATGGCAAAGAGAAGTGATTATTATCATATTAAAAAGCAGATTGAGTCAGAATTTGTTGATGGTGGGAATGAGAGGTCATCAAAATCTTTTCTTGACCTGCCCAAGTCAGAGCAACAATTGAGGTTGAAAGATCGATTGAAGAAATACTGCCAGAAGGCATATAAGCGGGTGCTTGACAAACCAGTTACTGAACTCCGTGAAGCTGGAATCTGCATGCGTGAAAATCCATTTTATGTTGACACTGTTCGCAGTTTCCGGGATAGAAGATATGAATATAAAGGCCTTAACAAGGTTTGGAAGGGGAAATTATCAGAAGCCAAAGCCAGTGGAAATTCTATGAAGATCCAGGAAGCACAAGACATGGTTGTGCTTTATGATTCATTACAACTTGCTCACAAGTGTATACTTAATTCCTTTTATGGATATGTCATGCGCAAGGGTGCTAGATGGTACTCTATGGAAATGGCTGGAGTAGTCACATATACTGGTGCAAAAATAATCCAGAATGCCCGTTTGCTGGTAGAGAAAATAGGAAAACCACTTGAACTAGATACTGATGGTATCTGGTGTGCACTGCCTGGATCTTTTCCAGAAAATTTCACTTTTAAAACAAATGACTCAAAGAGGAAGTTGACAATCTCATACCCTTGTGTTATGCTTAATGTTGATGTGGCAATAAATAATACAAATGATCAGTACCAGACACTTACAGATCCAATCAGGAAAACTTATACAACTCATAGTGAGTGCTCTATTGAATTTGAGGTGGATGGACCATACAAGGCAATGATTCTTCCTGCTTCCAAGGAAGAAGGAATTCTAATTAAAAAGCGATATGCTGTTTTTAATGATGATGGAACACTTGCTGAACTGAAAGGTTTTGAGATCAAGCGAAGAGGTGAACTGAAGCTAATTAAAGTTTTCCAGGCTGAGCTTTTTGACAAATTTCTTCATGGTTCAACCTTAGTCGAATGCTATTCAGCTGTAGCTGCTGTGGCAAATCGCTGGCTTGATCTTCTTGATAACCAAGGACAGGATGTTGCAGATAGTGAGTTGCTTGATTACATATCAGAATCAAGTACCATGAGCAAGTCTTTAGCTGATTACGGTGAGCAGAAGTCTTGTGCTGTTACCACTGCTAAACGTCTTGCTCACTTTCTTGGTGATACAATGGTCAAAGATAAAGGTCTTCGATGCCAGTACATAGTAGCAAGTGAACCTAAGGGAACACCTGTAAGCGAGCGTGCTATTCCTGTTGCAATATTTGAAACTGATGCTGAAGTAATGAAGTTCTATGTTCGGAAATGGTGCAAGGTCTCATCAGATGTTGGCATACGGTCCATAGTTGACTGGTCCTATTACAAGCAGCGGCTTTGTTCGGCAATTCAAAAAATTGTCACTATTCCTGCTGCAATGCAAAAGGTTTCAAATCCCGTCCCTAGGGTAGCTCATCCTGATTGGTTGCATAAGAAGGTTCGTGAGAAGGAGGACAAGTTCCGCCAACGAAAATTAGTTGATGTCTTTAACTCAATGAACAAGGATGAGCACTCAAAAAAGCGTAGTGACTCTAATGGTGTCAGCCCTGTGATGGATGAAGAAGTGATTGACTTGGAGGACTTTGGAAACAAAGCCAGGAGTTCTACACCTGGTCCTAGACCAATTATACGCCATTATGAATCTAATAATGAAAGACATTCAGTGAATCTAACATGTGAAAATGTTGATAGAAATGTTGATTATCAGGGATGGCTTCAAACAAAGAAAAGAAAGTGGAAAGATATCCTGGAAAGGAGAAAAAGGCGAAGATTGGAGAATTCAACGAAATCTGATCGTGGAAATGGAGTTTTTAAACAGTTGAATGGTAAGATGAATCAGGGCAGAAGTAATGTCAGTTCATATTTCAGAACGCATGAGGTTGCCTTGATGCAGTGCCACTGGCAGATAATACAGCTAATTCACAGTTCAAAGATTGGCCAGCTTTTGGCATGGGTTGTTGTTGATGGGATTATGCTTAAGATTCCTGTTTCTGTTCCTAGAGTCTTTTACCTTAACTCTAGATCACCAATTACCGAAGAATTTCATAGCAAACGTGTCAACAAGACTCTCCCTCGTGGAAGGCGTAGTTATAATCTGTATGAGGTTTCAATTGATGAAGTCCAATTTAGGGAATCAAGTCAAAGACTTGCAGCTCTCCTTGCAGATCCTGATGTTGAGGGAATGTATGAAACAAAGGTACCACTAGACTTTAATGCTATAGTCCAGCTTGGTTGTGTATGTAAGGTGGACAAAACTGCCAAACAGCGCAGTCTACAAGACTCATGGAATTTGAGTGAGTTACACATGAAGACTACAACAGAAAGCCCTTATCTCGAACAATCCATATCCTTCTTTTACTTATATCATAGCATCTGCGAGGGACGGGCTATATACGTTGGATATTTTCCTGCATCAAAAGCAATAACTGTTGTGGTAGTTAATCCATATCAAAACAAGGATCTATCTCCAACTTTTCTTGAAAGACAATATCATGATGCATGCCAAACTTTGTCTATTGAGCCACCTCAACGGAATAGCATTAGTTTTAAGGTGGACTATGTTTCACATGTCAAGGATGCTGAAACAGTGATGCAAACAGCAATAAATGATCACAGGAATGAATATCATGGGCCTATGGTTGCTGTCGTTGAATGCCCAAATGTTCAGCTAGCAAAATCGGGTATTCGAGTTCTAGATGATTTTCCATGTCTGAGTATTCCTTCTAATGCCCGTGATAGTCAGTATCAGATTCTTGGATGGCAACAAGTTGCTGCAAAAATTGGAATGCAACGTTGTGCTGCATCAGTCCAGTGGCTAAACGAGAGGATTGCTCTCTCAAGATATGCCCATGTGCCATTGGGGAATTTTGAACTTGACTGGCTTATATTTACAGCGGACACCTTCTTTTCAAGAGCACTGCATGATAGTCAACAGGTACTTTGGATATCTGATGACGGTCTTCCAGATTTAGGTGGCATTAATGATGAAGAGACTTTTTTTCTTGATGAGGTCCACCAACCTGTCCTTACATATCCCAAAGCTTACAGAAAAGTTACTGTGGAGCTAAAGATACATCACCTGGCTGTGGATGCTCTTCTAAAATGCAATCAGGTTAATGAAATGGAAGGAGGTGCTTTATTAGGATTTGATCATGAATCCAATTCTGGAGCAATTTCTATGAACGATCAAAACGGCTTTGATGAGGCGACCTCATGTGCACCTGCCTTTCGAGTCCTAAAACAGTTGATTCAGCGGTGCCTTACAGATGCAGTTACGTCTGGAAATGTATACGCTGATGCAATATTACAACATCTATATCGATGGCTTTGCAGCCCTCAATCAAAACTTCATGATCCAGCTCTTCACCAGCTACTCAACAAGGTCATGCAAAAGGTCTTTGCATTGTTGTTGGCAGAATTCCGCAAGTTGGGTGCAACAATTGTTTTTGCAAACTTCTCAAAGATTATTATAGACACAGGCAAATATGATCTTGCAGCAGCTAAAGCGTATTGTGATAGCCTGTTAAGAACTATACAATCTAGAGACTTATTTGAATGGATTGAGCTTGAACCATTGCAGTTCTGGCAATCATTGCTATTCATGGATCAGTATAACTATGGTGGAATACCGGAAAAGTCTGATGAAGCCATAAATGATGAATCTCAAGTTGACATTATATCGAGCTGGAATATTGCTGAATACTTGCCAAAGAAAATCCAGGACCATTTCATTTTCATTGTTTCTCAGTTCTTATATATTCCTTGGAACTATGCACAAAAACAAGTAGCAATTAGAGCATCAATGCAGGATGGCGATTTCTGCACCCCATCAATTAACATTGGAGCTGCAGAAGCTTTTGACACAGAAATGACAGAATATATTAAAGGGCAGATCAGCTCTTACTTCACAGACAAACTTCTGGGCATTGTTCGTGATATGAAAGGGATGATCAGATCAGAAAATGACCTGAATACGTCATCTGGCCTTCCTCAACTAGTGGGTAATCTCCACAGAGGAGATGCAGCTTTGGAATTCATTAAGCATGTCTGTGCTGTCCTGGCCCTCGACCAAAGTGTGCAGCATGATGTTTTGGTCATGAGAAAGAATCTGTTAAAATATGTTCATGTGAGGGAGTTTGCTCCAGAAGCTGAATTTCGTGATCCTTGCCATTCCTTCATCTTATCCAATGTCATCTGCAGCTATTGCAATGACTGCAGAGACTTGGACTTGTGCCGTGACTCAGCTTTATTGACTCAGGAGTGGCGATGTGCAGTGCCACAGTGTGGTCAGCCTTATGACCGAGAGGTGATGGAAAATGCTCTCCTTCAGATTGTACGACAAAGAGAACGGCTATACCACCTGCAAGATCTGGTGTGCCTAAGGTGCAACCAGGTGAAAGCTGCACATTTGGCTGAGCAATGTGCATGTGCAGGCTCTTATAGGTGCAAGGAAGATGCAGCTGAATTTCGGGCAAAGATGCAGGTTTTCTTGAACATAGCTTTTCGTCAGAAATTCCAACTCCTTCACGAATGCACCTCCTGGATTTTAGAACACAGATAG 6543 0.4093 MNGDGRRRDRWDNTRRSKKQKQIRNAEEELEAKLGFDLFSEGEKRLGWLLNFASSSYEDEETRKVYSCVDLYFVTQDGSSFKTKYRFRPYFYAATKDKMEMDVEAYLRRRYEAQIADIEIIEREDLDLKNHLSGLRKSYLKLSFDTVQQLMNVKSDLMHVVERNKAKSDAAEAYESILSGRREQKPQDFIDCIIDLREYDVPYHVRFAIDNDIRSGQWYNVAVSNTGVTLEKRTDLLQRAEVRICAFDIETTKLPLKFPDADYDLIMMISYMIDGQGYLIINRECVGEDIEDLEYTPKPEFEGCFKVTNVQTEVELLRLWFSHMQEVKPGIYVTYNGDFFDWPFLEKRAAHHGFKMSDELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVVCPNKHQSDPEKFYNNHLLESETYIGGHVECLESGVFRSDIPTSFTLEPSAYEQLINNLDRDLQYAIRVEGKMDLETVSNYDEVKNAIMEKLVKLRDVPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGETFMAKRSDYYHIKKQIESEFVDGGNERSSKSFLDLPKSEQQLRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSMKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTNDSKRKLTISYPCVMLNVDVAINNTNDQYQTLTDPIRKTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLVECYSAVAAVANRWLDLLDNQGQDVADSELLDYISESSTMSKSLADYGEQKSCAVTTAKRLAHFLGDTMVKDKGLRCQYIVASEPKGTPVSERAIPVAIFETDAEVMKFYVRKWCKVSSDVGIRSIVDWSYYKQRLCSAIQKIVTIPAAMQKVSNPVPRVAHPDWLHKKVREKEDKFRQRKLVDVFNSMNKDEHSKKRSDSNGVSPVMDEEVIDLEDFGNKARSSTPGPRPIIRHYESNNERHSVNLTCENVDRNVDYQGWLQTKKRKWKDILERRKRRRLENSTKSDRGNGVFKQLNGKMNQGRSNVSSYFRTHEVALMQCHWQIIQLIHSSKIGQLLAWVVVDGIMLKIPVSVPRVFYLNSRSPITEEFHSKRVNKTLPRGRRSYNLYEVSIDEVQFRESSQRLAALLADPDVEGMYETKVPLDFNAIVQLGCVCKVDKTAKQRSLQDSWNLSELHMKTTTESPYLEQSISFFYLYHSICEGRAIYVGYFPASKAITVVVVNPYQNKDLSPTFLERQYHDACQTLSIEPPQRNSISFKVDYVSHVKDAETVMQTAINDHRNEYHGPMVAVVECPNVQLAKSGIRVLDDFPCLSIPSNARDSQYQILGWQQVAAKIGMQRCAASVQWLNERIALSRYAHVPLGNFELDWLIFTADTFFSRALHDSQQVLWISDDGLPDLGGINDEETFFLDEVHQPVLTYPKAYRKVTVELKIHHLAVDALLKCNQVNEMEGGALLGFDHESNSGAISMNDQNGFDEATSCAPAFRVLKQLIQRCLTDAVTSGNVYADAILQHLYRWLCSPQSKLHDPALHQLLNKVMQKVFALLLAEFRKLGATIVFANFSKIIIDTGKYDLAAAKAYCDSLLRTIQSRDLFEWIELEPLQFWQSLLFMDQYNYGGIPEKSDEAINDESQVDIISSWNIAEYLPKKIQDHFIFIVSQFLYIPWNYAQKQVAIRASMQDGDFCTPSINIGAAEAFDTEMTEYIKGQISSYFTDKLLGIVRDMKGMIRSENDLNTSSGLPQLVGNLHRGDAALEFIKHVCAVLALDQSVQHDVLVMRKNLLKYVHVREFAPEAEFRDPCHSFILSNVICSYCNDCRDLDLCRDSALLTQEWRCAVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCLRCNQVKAAHLAEQCACAGSYRCKEDAAEFRAKMQVFLNIAFRQKFQLLHECTSWILEHR* 2181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2876 2180 SUPERFAMILY Ribonuclease H-like 61 468 IPR012337 -
Aev04g2876 2180 Pfam Domain of unknown function (DUF1744) 1504 1870 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Aev04g2876 2180 MobiDBLite consensus disorder prediction 1251 1270 - -
Aev04g2876 2180 Gene3D - 239 469 IPR036397 GO:0003676
Aev04g2876 2180 SMART polmehr3 240 843 IPR006172 GO:0000166|GO:0003676|GO:0003887
Aev04g2876 2180 SUPERFAMILY DNA/RNA polymerases 487 1116 IPR043502 -
Aev04g2876 2180 SMART DUF1744_2 1486 1870 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Aev04g2876 2180 CDD DNA_polB_epsilon_exo 241 444 - -
Aev04g2876 2180 CDD POLBc_epsilon 504 1123 - -
Aev04g2876 2180 MobiDBLite consensus disorder prediction 1 24 - -
Aev04g2876 2180 Pfam DNA polymerase family B 754 1071 IPR006134 GO:0000166|GO:0003677
Aev04g2876 2180 Gene3D Palm domain of DNA polymerase 755 938 IPR023211 -
Aev04g2876 2180 Gene3D DNA Polymerase, chain B, domain 1 52 233 - -
Aev04g2876 2180 Gene3D - 942 1126 IPR042087 -
Aev04g2876 2180 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 33 2177 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Aev04g2876 2180 Pfam DNA polymerase family B, exonuclease domain 75 401 IPR006133 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2876 5 2177 Core DNA Replication Machinery Family AT2G27120 68.464 0.0 3070
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2876 K02324 - gmx:100812003 3808.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2876 04 28539590 28562236 Aev04g2876 04 28539590 28562236 ECH