Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2868 ATGAGGGGAAATCAGAAGGGTCCTTTAGAAGAAGAGGGGTGGACTGTGGTCAGAAGAAGGAAGTGGGGGTCGAAGGACAAGCAGCGTCTTTCAAAAGGAGATGGTGAGCCTCGGGACAGGATTGGAGAGATGGAGTCTAAGTGCCATACGGTGTATGTGGACGGTCTACCAAAGGAAGTCTCAAAGGGCATGATGTATAAAGTGTTCGGCAGAGTTGGAAGAGTTGTTGATGTGTATATTTCCAGGAAAAAGCGGGCTAAGTCGAAGTACTCATTTGCCTTTGTCAGATTTGATGCAAAGGGGGGAGCTGAAAGGGCCATTGTCAAACTGAATAATATCATGATAGGAGGTAATGGAATTATGGTTAATATGGCCAAGTTTGGTCGTGGAGGGTCGACAAGAAAGCTTGCTAGAAGGAAGCTCCAGACAATCAATGTTGTGAGGATAGGACGGGTCGAGAATCCACCTAAGGGACAGAGGGATCCAGAAGTTAGTGACAATGTTGGTGGTAGTTCGAGGGACATTGACCCCAACCGTATAGAAGTCTTTAGTCAACCGTCCTTGGTGGAGAAGCTAAAGAGGAGTCTCGTTGGATCGTCCAAATATCCAATGAGCTTTAATAAAATAAGTCGACTAGTGGAGGAAGCAGGGGTAGATTGGGGTGAATTGGTGTGTAGTGAAGTAGGGGCATTTAAGTTTATGGTAACTTTCCAAACGGTGGAGTTCATGCGCAGGGCTTTGGATTCAGATTACCTACTCAGCTTGTTTGATGAAGTACGACCATGGAGTGTGTCTACTACCTGTGAGTCGAGGAGAGTTTGGGTGGAGATTTTTGGACTCCCGTTTCAAGCTTGGTGTGAGGATACGCTATGTTCTATTGGGAAGCTATGGGGTATTGTCGTTATGGTGGATGAGGGTCCAGCCTCTGATCGGTCTTATAGCTCAGCTAAAATTCTGATCGACACCAACTACTGGAATCTCATCAATGGAGAAGTATTCATAGTATGTGATGGTATCAATTTCACAATTTATGTGAAGGAGATCGGGAGGGACATGTATGGATATCAATCCTTTGCTCACTTGGAGAATGATGTGGAGTGTAATGGTAAAGCAGCGGAAGGCGATAAAGAAGCGGAAGTGGTGGTGGCCAACGCGTGCGGCGGTGTTGTATCAGAAAACAACAATGGTGATGGAAGCGGCACAGTTGCAGTGAAGAACCAGCAGGATGGTGAGTCGCCCAAGAATGGTAAGGCGGCTGGTGGGGTGGCGTGCATGGGGAACTCAAACAAAACTCATTTAAAGCTTGTGGAGTTTGTGGACCCCATTGTGAATGATTTGATGACAAGTGGGTTTCAATGGGTGTCAGAAGGTGGTGTTGAGGAGGGTGCAAGTGTTCATGCAATTTCTAACACTTATACTCCAGCCCAGGATTACTGCTACAATATTGGGCCTGTGGGTGCCCAACCCATTTTGGAGGGTGAACAAGTAAATGCGTCAGAAAATGGGAATGGGCCTATTGGTGAGGATAGGTTGGTAAATGTGGGGCTTTCTTCCCCTGCTAGTATGCAACCGCATACTTCGTGTCCAGGTCCTGAGAGTGGTGACATTGTGTGTGACACAAATGACAAAAATCTGATTATAAAAGAAACTCAATTGCAGGATGATGCAGCTAGTGGGAATTTTGATGCTTTTTCGAATTCCCAATCAGTTTTGAGTGGTGATGGAGCGTCCTCAACATGTAGAGATGCTGGAATAGAAGCATATTCTGATGACGAGTTAAAATTCCTGGCTAAGCTGAAGAATCGAAATCGTGAGAGAGAAGCGGCCAAGAAGATGAGAGCGGCGGGTCGCAAAGCAGCGGCGACGCGTCTTTATGGAAGGGAATGGTTAGAGTAG 1896 0.4641 MRGNQKGPLEEEGWTVVRRRKWGSKDKQRLSKGDGEPRDRIGEMESKCHTVYVDGLPKEVSKGMMYKVFGRVGRVVDVYISRKKRAKSKYSFAFVRFDAKGGAERAIVKLNNIMIGGNGIMVNMAKFGRGGSTRKLARRKLQTINVVRIGRVENPPKGQRDPEVSDNVGGSSRDIDPNRIEVFSQPSLVEKLKRSLVGSSKYPMSFNKISRLVEEAGVDWGELVCSEVGAFKFMVTFQTVEFMRRALDSDYLLSLFDEVRPWSVSTTCESRRVWVEIFGLPFQAWCEDTLCSIGKLWGIVVMVDEGPASDRSYSSAKILIDTNYWNLINGEVFIVCDGINFTIYVKEIGRDMYGYQSFAHLENDVECNGKAAEGDKEAEVVVANACGGVVSENNNGDGSGTVAVKNQQDGESPKNGKAAGGVACMGNSNKTHLKLVEFVDPIVNDLMTSGFQWVSEGGVEEGASVHAISNTYTPAQDYCYNIGPVGAQPILEGEQVNASENGNGPIGEDRLVNVGLSSPASMQPHTSCPGPESGDIVCDTNDKNLIIKETQLQDDAASGNFDAFSNSQSVLSGDGASSTCRDAGIEAYSDDELKFLAKLKNRNREREAAKKMRAAGRKAAATRLYGREWLE* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2868 631 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 62 363 - -
Aev04g2868 631 PANTHER RNA RECOGNITION MOTIF 62 363 - -
Aev04g2868 631 SMART rrm1_1 50 123 IPR000504 GO:0003723
Aev04g2868 631 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 49 127 IPR000504 GO:0003723
Aev04g2868 631 MobiDBLite consensus disorder prediction 397 413 - -
Aev04g2868 631 MobiDBLite consensus disorder prediction 152 171 - -
Aev04g2868 631 Pfam Domain of unknown function (DUF4283) 188 320 IPR025558 -
Aev04g2868 631 CDD RRM_SF 51 123 - -
Aev04g2868 631 MobiDBLite consensus disorder prediction 397 419 - -
Aev04g2868 631 Gene3D - 18 170 IPR012677 -
Aev04g2868 631 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 51 119 IPR000504 GO:0003723
Aev04g2868 631 SUPERFAMILY RNA-binding domain, RBD 37 132 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2868 Aev-Chr4 28427159 28429054 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2868 51 153 Eukaryotic Initiation Factors Gene Family AT1G71770 28.155 9.85e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2868 K12891 - ahf:112794598 175.637