Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev04g2864 | ATGTACAGTAATTTCAAGGAGCAAGCGATAGAGTACGTGAAGCAAGCGGTGCAAGAGGACAACAATGGCAACTACGCGAAAGCCTTCCCTCTGTACATGAACGCCTTGGAGTACTTCAAGACGCACCTCAAGTACGAGAAGAACCCAAAGATCAAGGAGGCCATCACGCAGAAATTCACCGAGTATCTTCGCCGGGCAGAGGAGATCCGTGCCGTCCTCGATGATGGTGGGCCTGGGCCTGGGGCCAACGGGGACGCCGCCGTCGCCACGCGGCCCAAGACGAAGTCCAAGGGCGGGGAAGGAGGGAGTGGAGGTGGAGGGGATGGGGAGGATCCGGAGCAGGCGAAGCTGAGGGCGGGGCTGAACTCAGCGATCATAAGGGAGAAGCCGAACGTGAAGTGGAACGATGTAGCTGGGTTGGAGAGCGCCAAGCAGGCGTTGCAGGAGGCGGTTATCTTGCCCGTGAAGTTCCCTCAGTTCTTCACTGGTAAAAGACGACCTTGGAGAGCGTTTTTGTTGTATGGACCACCTGGAACAGGTAAATCATATTTGGCCAAAGCAGTTGCGACAGAAGCTGACTCCACATTTTTCAGTGTTTCATCTTCAGACTTGGTTTCAAAGTGGATGGGTGAAAGTGAAAAGCTGGTTTCAAACCTTTTCGAAATGGCTCGAGAAAGTGCACCTTCTATCATATTTATTGATGAAATAGATTCACTATGTGGTCAGCGTGGTGAAGGCAATGAGAGTGAAGCTTCCAGACGAATTAAAACTGAACTTCTAGTGCAGATGCAGGGTGTAGGACACAATGACCAGAAAGTCCTTGTTCTTGCAGCAACAAATACTCCTTATGCTCTTGACCAGGCGATAAGGCGACGTTTTGATAAGCGTATATATATTCCACTACCAGATTTGAAGGCTCGCCAACACATGTTCAAGGTGCATCTAGGAGATACACCTCATAACTTGACTGAAAGTGATTTTGAACACTTGGCTCGCAGGACGGATGGATTTTCAGGTTCAGATATATCCGTTTGTGTGAAGGATGTGTTATTTGAACCTGTTCGCAAAACCCAAGACGCCATGTTTTTCTTTAAGAATCCTGAGGGTATGTGGATCCCATGTGGACCAAAGCAACAGGGTGCAGTACAAATCACGATGCAGGAGCTTGCTGCGAAAGGACTTGCATCTCAGATCCTTCCACCACCTATATCGAGAACCGATTTTGACAAGGTGCTTGCTAGACAACGGCCTACAGTGAGCAAAGCCGACCTTGATGTTCATGAGAGATTCACAAAGGAGTTTGGAGAGGAAGCTATTGGAGCAAAGTGA | 1329 | 0.4913 | MYSNFKEQAIEYVKQAVQEDNNGNYAKAFPLYMNALEYFKTHLKYEKNPKIKEAITQKFTEYLRRAEEIRAVLDDGGPGPGANGDAAVATRPKTKSKGGEGGSGGGGDGEDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFEHLARRTDGFSGSDISVCVKDVLFEPVRKTQDAMFFFKNPEGMWIPCGPKQQGAVQITMQELAAKGLASQILPPPISRTDFDKVLARQRPTVSKADLDVHERFTKEFGEEAIGAK* | 443 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev04g2864 | 442 | CDD | AAA | 138 | 301 | - | - | |
Aev04g2864 | 442 | Pfam | MIT (microtubule interacting and transport) domain | 7 | 70 | IPR007330 | - | |
Aev04g2864 | 442 | Pfam | ATPase family associated with various cellular activities (AAA) | 172 | 301 | IPR003959 | GO:0005524|GO:0016887 | |
Aev04g2864 | 442 | SMART | AAA_5 | 167 | 303 | IPR003593 | - | |
Aev04g2864 | 442 | Pfam | Vps4 C terminal oligomerisation domain | 371 | 435 | IPR015415 | - | |
Aev04g2864 | 442 | SUPERFAMILY | MIT domain | 2 | 83 | IPR036181 | - | |
Aev04g2864 | 442 | PANTHER | AAA DOMAIN-CONTAINING | 1 | 437 | - | - | |
Aev04g2864 | 442 | Gene3D | - | 303 | 418 | - | - | |
Aev04g2864 | 442 | MobiDBLite | consensus disorder prediction | 72 | 114 | - | - | |
Aev04g2864 | 442 | Gene3D | - | 130 | 426 | IPR027417 | - | |
Aev04g2864 | 442 | SMART | smart | 2 | 79 | IPR007330 | - | |
Aev04g2864 | 442 | Gene3D | - | 6 | 75 | - | - | |
Aev04g2864 | 442 | PANTHER | AAA-TYPE ATPASE FAMILY PROTEIN | 1 | 437 | - | - | |
Aev04g2864 | 442 | ProSitePatterns | AAA-protein family signature. | 273 | 292 | IPR003960 | GO:0005524|GO:0016887 | |
Aev04g2864 | 442 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 130 | 433 | IPR027417 | - | |
Aev04g2864 | 442 | CDD | MIT_VPS4 | 4 | 77 | IPR045253 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev04g2864 | Aev-Chr4 | 28368634 | 28373305 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev04g2864 | 166 | 359 | Calmodulin-binding Proteins | AT3G56690 | 37.245 | 4.91e-35 | 136 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev04g2864 | K12196 | - | gmx:100788150 | 814.298 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev04g2864 | 04 | 28368634 | 28373305 | Aev04g2864 | 04 | 28368634 | 28373305 | ECH | |
Aev10g2181 | 10 | 22232288 | 22235296 | Aev04g2864 | 04 | 28368634 | 28373305 | ECH | |
Aev10g2181 | 10 | 22232288 | 22235296 | Aev04g2864 | 04 | 28368634 | 28373305 | PCT |