Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2860 ATGGCGGAAGAACATAGGTGTCAAGCTCCACGTCTCTGCGCTAACAACTGCGGTTTCTTCGGAAGCCCTGGGACGCAAGATCTCTGCTCCAAATGCCACCGCGATCTCCAACTCGCGGAACAACAATCTTCCTCCGCAAAATTGGTCCTAAGCCAAACCCTAGCTCCTCCTTCGTCTCCGGCGGTTTCATCTTCGCCGGTTGAACCAGTTGCCGCTCCTTCATCATCATCATCATCATCATCATCATCGGTTGACGATGCGCCACCGAGCGCGTCGACGACGGAGGAGAAGGTTGGATCTGCGGTTACGGCGAATAGGTGCGCGTCTTGCAGGAAGCGCGTGGGGCTCACGGGGTTCAAGTGCAGGTGCGGGTTGACGCTATGCGGGTCACACCGGTACCCGGAAGGGCACGGGTGCGGGTTCGATTTCAAAGCCATGGGGAGGGATCAGATCGCGAAGGCGAACCCGGTGGTGAAGGGCGAGAAGCTACAAAAGATCTAA 501 0.5729 MAEEHRCQAPRLCANNCGFFGSPGTQDLCSKCHRDLQLAEQQSSSAKLVLSQTLAPPSSPAVSSSPVEPVAAPSSSSSSSSSSVDDAPPSASTTEEKVGSAVTANRCASCRKRVGLTGFKCRCGLTLCGSHRYPEGHGCGFDFKAMGRDQIAKANPVVKGEKLQKI* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2860 166 Pfam AN1-like Zinc finger 107 143 IPR000058 GO:0008270
Aev04g2860 166 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 56 - -
Aev04g2860 166 Gene3D - 90 152 IPR035896 -
Aev04g2860 166 SMART AN1_Zf_4 107 144 IPR000058 GO:0008270
Aev04g2860 166 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 166 - -
Aev04g2860 166 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 166 - -
Aev04g2860 166 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Aev04g2860 166 Gene3D - 1 89 - -
Aev04g2860 166 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Aev04g2860 166 MobiDBLite consensus disorder prediction 47 98 - -
Aev04g2860 166 SUPERFAMILY AN1-like Zinc finger 98 161 IPR035896 -
Aev04g2860 166 ProSiteProfiles Zinc finger AN1-type profile. 101 147 IPR000058 GO:0008270
Aev04g2860 166 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2860 Aev-Chr4 28347267 28347767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2860 1 166 C2H2 Transcription Factor Family AT3G52800 50.857 5.69e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2860 - - mesc:110625469 208.379