Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2851 ATGTACCATCATCAAGGAAAGAACATTCATTCATCTTCAAGAATGCCAATATCTTCTGAGAGGCACATGTTCCTCCAAAATGGGTCTGGAAGTGATTCTGGACTTGTTCTTTCAACTGATGCCAAGCCTAGATTGAAATGGACACCAGATCTTCATGCCAGGTTCATAGAAGCTGTTCATCAGTTAGGTGGAGCTGACAAGGCAACTCCAAAAACTGTGATGAAACTCATGGGAATTCCAGGACTTACTTTGTATCATCTTAAGAGTCATCTTCAGAAATACAGATTGAGCAAGAATCTACATGGACAAAGTAACAATGTGACAACACACAAAATAACTTCAAATCCAACTGCAACTCCAGAAGAAAGACCATCTGAAAGCAATGGAACTCACATACAGAACTTAAACATTGCACCTCAGTCTAATAACAAAGATTTACACATAAGTGAGGCACTGCAGATGCAGATAGAGGTTCAAAGAAGGCTAAATGAACAACTTGAGGTACAAAGACACTTACAAATGAGGATAGAGGCACAAGGAAAATACCTTCAAGCAGTGCTTGAGAAAGCTCAAGAAACAATAGGAAGACAGAATATGGGAATGGTAGGACTTGAAACTGCAAAAGTCCAACTCTCAGAGCTCGTATCAAAAGTCTCTTCTCAGTGCCTAAACTCTGCATTCTCAGAACTCAAGGAACTACAAGGATTCAGCCCTCAGCAACAAACCAACAACCTTATTCCAAACAACAATGATTGCTCAATGGATAGTTGCCTCACATCATCATGCTGTGATGGATCATCACAACAAAAGGACCAACAAGAGATAATGCAAAATGGGGGAGTCATTAACTTAAGACCCTTCAATGGCCATTCATTCATGAACAGAAAGGAAGTCATAGAGGGTCCTAAGAATTGGTGTGAACAAGTGAAGAAGAAGAATAACAACAACTTTCTCAGTGCCCCTTTAGGGAAGAGTTCAGAAAGAAGGGGTTTTGATGTGGAAAGAAGTACAAGTAATAGCTTATCAATGAGCCTTGGAATTGAAGGTGAAACAGAGAATAATGGAAGCAGGGGTGAGAAAAATTCTCAGGATTATAGGTTGCCTTGTTATTTTGCAGCAACAAGATTGGACTTGAATGCTCGTGATCAAGATCATCAAAATGAAGCTGCAACAACAAAGAGTTGTAAGCAATTGGACTTGAATGGATTCAGTTGGAATTAA 1221 0.3956 MYHHQGKNIHSSSRMPISSERHMFLQNGSGSDSGLVLSTDAKPRLKWTPDLHARFIEAVHQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNVTTHKITSNPTATPEERPSESNGTHIQNLNIAPQSNNKDLHISEALQMQIEVQRRLNEQLEVQRHLQMRIEAQGKYLQAVLEKAQETIGRQNMGMVGLETAKVQLSELVSKVSSQCLNSAFSELKELQGFSPQQQTNNLIPNNNDCSMDSCLTSSCCDGSSQQKDQQEIMQNGGVINLRPFNGHSFMNRKEVIEGPKNWCEQVKKKNNNNFLSAPLGKSSERRGFDVERSTSNSLSMSLGIEGETENNGSRGEKNSQDYRLPCYFAATRLDLNARDQDHQNEAATTKSCKQLDLNGFSWN* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2851 406 MobiDBLite consensus disorder prediction 335 352 - -
Aev04g2851 406 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 42 97 IPR006447 GO:0003677
Aev04g2851 406 MobiDBLite consensus disorder prediction 317 361 - -
Aev04g2851 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 99 IPR017930 -
Aev04g2851 406 PANTHER MYB-RELATED PROTEIN 2 2 406 - -
Aev04g2851 406 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 406 IPR044848 GO:0003700
Aev04g2851 406 SUPERFAMILY Homeodomain-like 41 97 IPR009057 -
Aev04g2851 406 Pfam Myb-like DNA-binding domain 44 95 IPR001005 -
Aev04g2851 406 Pfam MYB-CC type transfactor, LHEQLE motif 147 193 IPR025756 -
Aev04g2851 406 Coils Coil 149 169 - -
Aev04g2851 406 MobiDBLite consensus disorder prediction 100 139 - -
Aev04g2851 406 Gene3D - 41 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2851 Aev-Chr4 28223999 28227283 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2851 74 406 G2-like Transcription Factor Family AT3G04030 49.419 7.23e-85 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev04g2851 Myb_DNA-binding 1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2851 - - gmx:100805237 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2170 10 22169959 22172123 Aev04g2851 04 28223999 28227283 PCT