Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2838 ATGATGGAAGATCTTCCACCTGGGTTTCGGTTCTTCCCAACTGAAGAGGAGCTAGTTGGGTTCTATCTGCACAACAAGCTTGAAGGGAATAATATAAATGACATGGACAGAGTTATCCCTGTCATTGACATCAATGGTGTTGAGCCTTGGAGCCTTCCAACACTAGCAGGGGATATTTGTCGCGGGGAGAGAGAGCAATGGTTCTTCTTTTCAGCGGGACAGGCGAGGGAGGCGAGGGGAGGGAGGCCGAACAGAACAACAGAGAGTGGGTACTGGAAGGCGACGGGGTCGCCAGGGTACGTGTACTCCTCAGAGAACAGAGTAATTGGGGTCAAGAAAACTATGGTTTTCTACAAAGGGAGAGCGCCAACTGGAAGGAAAACCAAGTGGAAGATGAATGAGTATAGAGCCATCCAACTCTCGAGCCAATCTGCCACTTCACCACCTCAGTTGAGGAGGGAATTCAGCTTGTGTCGGATTTATGTCGTATCGGGAAGCTTTCGAGCATTTGATAGAAGACCATTAGAGAATAATAATAATAATAATAATAATAATCCTAGAACAGAGTCACACGAGATTATTGATCAAAACAGAGTCATTATTGCTCCATCATCATCATCATTTGCTTATTCAAGTGCTATTGATGCATCAACTTCATCTGAAACTACGCACATAGGAGAAATAATAAATAATGCTACTGGAGTAGCCTCAAGTAGCACAAATTGGTGGAATAATAATAATAATGATAATAACAATAATTATTATTATTATGGGGTCCATCAAGTTCAAGAACCTGTGTGGGAATGGGGGGAAATCAATTGGCTCTAA 828 0.4287 MMEDLPPGFRFFPTEEELVGFYLHNKLEGNNINDMDRVIPVIDINGVEPWSLPTLAGDICRGEREQWFFFSAGQAREARGGRPNRTTESGYWKATGSPGYVYSSENRVIGVKKTMVFYKGRAPTGRKTKWKMNEYRAIQLSSQSATSPPQLRREFSLCRIYVVSGSFRAFDRRPLENNNNNNNNNPRTESHEIIDQNRVIIAPSSSSFAYSSAIDASTSSETTHIGEIINNATGVASSSTNWWNNNNNDNNNNYYYYGVHQVQEPVWEWGEINWL* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2838 275 PANTHER NAC DOMAIN-CONTAINING PROTEIN 90 5 269 - -
Aev04g2838 275 Pfam No apical meristem (NAM) protein 6 136 IPR003441 GO:0003677|GO:0006355
Aev04g2838 275 MobiDBLite consensus disorder prediction 172 192 - -
Aev04g2838 275 SUPERFAMILY NAC domain 3 162 IPR036093 GO:0003677|GO:0006355
Aev04g2838 275 MobiDBLite consensus disorder prediction 173 190 - -
Aev04g2838 275 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 269 - -
Aev04g2838 275 ProSiteProfiles NAC domain profile. 5 163 IPR003441 GO:0003677|GO:0006355
Aev04g2838 275 Gene3D NAC domain 14 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2838 Aev-Chr4 28131153 28134178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2838 1 274 NAC Transcription Factor Family AT5G22380 47.292 5.06e-83 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev04g2838 NAM 4.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2838 - - gmx:100780264 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2157 10 22124493 22125469 Aev04g2838 04 28131153 28134178 PCT