Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2828 ATGTTTCCTGGGTTCAGGTTCTGTCCCACTGACAACGAGTTAATCTCATATTACCTCAAGAACAAGTTAGATGGCCATCATGGCACTGTTCAAATCATTTCCGATGTTGAAATTTGTAGCTTTGAGCCTTGGGATTTACCAGCCAAGTCATTGATTGGATCAGATAAGGAGTGGTTCTTCTTCTCTCCGCGTGGAAGAAAGTACCCTAATGGGTCACAGAGCAAGAGAGCAACTGAATGTGGGTATTGGAAGGCCACAGGGAAAGAGCGCAATGTGAAGTCAGGCTCTAATGTTATAGGCACAAAGCGCACCTTGGTGTTCCACTTGGGGCGTGCACCTAAAGGCCAGAGAACTGAATGGATGATGCATGAATACTGCATCAATCACAACAAATTTCATCAAGATTCTTGGGTTGTTTGTCGCCTGAGGAAGAACAGAGAGTTTCGTAATTTGAATGATGATGGTTTGAATAGAGGTTCTTCAAGTCAAATGCCGGTAGTGAATTCACATGCTATCTCAGAAGAAGCTGGTGATGCTGACCAAAGGGGTTTATGTGATCATGATATTAAAAGGGTAACAAGTAGTTCCAAGAGGAGTAGCTCTAGTTTTGAATCTCCTTCAGTGGACCAAATTGATTCTGCATATGAATCCAATCATAGACCGACGCCAACCTATGGCGCCACTTTGACAGAATCTTCCAGCTATGGAAAGGGGGTGGATGAAGAGGATTGCTATGCTGAGATTTTAAAGGATGATATCATAAAATTAGATGAATCTTCACTCACACAAGAGACTTGCATTGGATCTCTGGATCTCCCACACATGCAAGGCACAGCTCTTCGAAGAATAAGACTGAGGCATTCTTCAAAGCACTCATCAAAACCTAACTTCTTTGCAATAATAATGACCAATCGTTTGGTTCTATTTTCTTTCTTCCTTTTCACATTGGTTGCTCTGTTTTCGCATGCCTTTATTAATTTGATGGTCTCAAACAGGTGA 999 0.4204 MFPGFRFCPTDNELISYYLKNKLDGHHGTVQIISDVEICSFEPWDLPAKSLIGSDKEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKSGSNVIGTKRTLVFHLGRAPKGQRTEWMMHEYCINHNKFHQDSWVVCRLRKNREFRNLNDDGLNRGSSSQMPVVNSHAISEEAGDADQRGLCDHDIKRVTSSSKRSSSSFESPSVDQIDSAYESNHRPTPTYGATLTESSSYGKGVDEEDCYAEILKDDIIKLDESSLTQETCIGSLDLPHMQGTALRRIRLRHSSKHSSKPNFFAIIMTNRLVLFSFFLFTLVALFSHAFINLMVSNR* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2828 332 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 1 296 - -
Aev04g2828 332 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 296 - -
Aev04g2828 332 MobiDBLite consensus disorder prediction 191 234 - -
Aev04g2828 332 Gene3D NAC domain 10 149 IPR036093 GO:0003677|GO:0006355
Aev04g2828 332 ProSiteProfiles NAC domain profile. 1 145 IPR003441 GO:0003677|GO:0006355
Aev04g2828 332 MobiDBLite consensus disorder prediction 195 234 - -
Aev04g2828 332 Pfam No apical meristem (NAM) protein 3 126 IPR003441 GO:0003677|GO:0006355
Aev04g2828 332 SUPERFAMILY NAC domain 2 144 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2828 Aev-Chr4 28022601 28026224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2828 1 318 NAC Transcription Factor Family AT2G27300 42.857 5.85e-83 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev04g2828 NAM 2.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2828 - - gsj:114373381 382.104