LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev04g2806	ATGGAGTCTAGGATGGATCAGTATGAGATCATGGAGCAGATCGGAAGAGGAGCTTTTGGTGCTGCTATTCTTGTAAATCATAAGGCTGAGAAGAAAAGATATGTGTTGAAGAAAATCAGGCTTGCTAGGCAGACTGAAAGATGCAGAAGATCTGCTCATCAAGAGATGGCTCTTATTGCTAGAATTCAGCATCCTTACATTGTGGAATTCAAGGAAGCTTGGGTGGAGAAGGGTTGCTATGTTTGTATTGTAACGGGATACTGTGAAGGAGGAGACATGGCTGAATTGATGAAAAAATCAAATGGTGCTTACTTTCCTGAGGAGAAACTCTGCAAATGGTTCACCCAATTATTGTTGGCAGTAGAGTACCTGCATTCAAATTTTGTTTTGCATCGTGACCTAAAGTGTTCCAACATCTTTCTTACGAAAGATCAGGATGTTCGCCTGGGGGATTTTGGGCTTGCTAAGACTCTAAAAGCAGATGATTTGGCTTCATCGGTGGTCGGAACTCCCAATTACATGTGTCCTGAACTGCTTGCAGATATTCCTTACGGATTCAAATCTGATATTTGGTCACTAGGGTGCTGTATATATGAGATGGCTGCTCATCGCCCTGCTTTTAAAGCTTTTGATATGGCAGGATTAATAAGCAAGATAAACCGTTCTTCAATTGGTCCTTTGCCTCCTTGTTATTCCCCTTCCTTGAAAACACTGATAAAGGGCATGCTGAGAAAAAATCCTGAACATCGACCAACAGCATCTGAGGTATTAAAGCACCCTTATTTGCAACCTTATGTTGAACAATATCGTCCATCTTTTAGTCCTCAGACATCGTGTTCTCCTGAGAAACCAGTCTCTTCTGTCAATTATTCCCGAAGAAATATGGCTGAAAGTCAAAACAGTAATAGTTCAAGTAGTGACAGAGATAGTTTGATGTCACATGAGAGACACACTGCAACAGCTGTTCCGGAGTGTGATAACAAAGCCACGGAAACGGATCTGGCGTCAGTTGATGATGATGATAGCTCAGAGCATCTCCTACCTAGTGAGGAAGAAAATGGTGGCAGCCATGTCAGTGCTAAAAAAGCTGAGCAAGAGGTGATGAAACCATCTCATAATGTACACAGCTCTAATATAGAATCTAAGCAGCCAAAAACAATTAGAAATATAATGATGGCATTAAAAGAGGGAAAACTTAGAGAAGCAACTTCTCCGATGAGAAGCAATCGTATAAAGGCTGGTGCTGTGTCAACGCCGAAAATAAATCCAGAGACGTCTTCCAAGTTGCCCAAACCTAATTTTGCGGCTCCTGGTTTGAAGCCCAATTTAGAGTCACCAGCTGTTGCACATGCAAAGGTATCCCCTGATTCTGCAAAACGTATACAAGGTTCACATCCTTATAAGCATCAGTTACTGATGATAGAATCCTCACCAAAAGCTAAACCCAGACATGATTTGACTCCACCATCTGGTCTTGTCAAACAAGTAGAAGGAGATGGAGTTCCTGCCAAGCCATTGCAAAGGACGCCCCCTAGCTTACTTAGACGACCGTCGTTTCCAGCACGAATACGGACTGCTGGGCTTGATATTGCGAATGTAGCAAATGATAATGGGAAGCTAGCTCCAAATAGAATGGCTCAGGAACCGGAGACAAGCCATTGCCAATTGACTAATGGCAATGTATCACATATTCCGAGACAGGTTGCCAGAGAGCCTCAGAGGGCTTTTGGAAGAAGCTCCAAAGGAATGCAAACAGACAGCAGTAATTCTGCCTCATCTTCAGTCTCTATTCAAGGATATGAACTTTATGATGATGCAACGACTTTTATTGACATGAGAGAACAGATACTTCCTGATAATGAGAGTGTAACCCGCAGTGTAGGTGTGGAATCAGGTCAAGATAGCAGCTCGCCTGCAAGCTGTTCAAATTGTCAGAAGGTTGAAATGGTCTCCAACAAAACCTGTGGGGTTCCACCGAATATTCAGAATACTACTAGTAGTAGTGAGAAAGTCAATTCGAAGATAGTTACCGATCATCCTGTTGAAGATCCTAAGATTATTTTTGCTTCAGAAGAAGGCCCTCCCATTAATCATACAAATATCTCTTCTGCCTCTGTATCTGATAAGAAATCTGTAGACCCTCCTGCTGAGGCCGCAGAAGAAATCAAAGGTCATCTAGATATTTCTGAAGAGATGATGTTAACCATGTCTCTCAAACATCCATCGCAAAGTTCTGCAGAAAAGCCTGTTTGTGAAGTTGTTCCGGTAAGCAAGCTTGATAATAGGACTGATGTAGTTAGCCAGCCAGAACTTGTGTGTAAGTCCCCTGGTGATGACAAATTCACAGTGAGGGAGCGGCTGTCATCAGTGGCTGAAACTATTCCACCTATAACCACTGCTAAAACATCAAGTCATAATGTTTTGCAAGAGAAAGGGACTGCTATGCCGAATCCAACACCAGAAAGGCCAGATGTTGGCCATCTTCCTGCGGCCTTTGATGATGTCATCCATGTTATACGCCATAGTAGTTATCGCGTTGGGAGTGAGCAGCCGGTAAAGGAATCCGTGGAGATGGGAGTTCAAAATTTAGATGTTGGTAAGTTTATTAACGTTGTGAGGGACGATTTAGAGACCAGAAATGTGAGCTCTCCTTTGACCCTCAAGTGTTCTGAACCTACAAGCACGAAACCAAATACTTCCGATCAGTTGGAAACAAGAAGCATTACTACTCCTCCTACCCTTAAATCTCCAAGTTTCTCTGATGCTTCAAGCTTAAAATCAAGCATTTCTGATCATCCTGGTTTTAAGGAACAAGATGTGAGTAACCCTGTTTCTTTAGTTTCAGAATCTGATTCCACCGAGTTAAGTAAATATAACACTCTCACGACCGAAGAAAAACCACCTCCGGCAAAGGAAACATTGGATGTGAAATCTTTCAGGCAGAGAGCCGAGGCGCTCGAAGAGCTCCTAGAATTGTCTGCAGAATTGCTGCAGCAAAATAGATTGGAGGAACTTCAAGTTGTTCTGAAGCCCTTTGGGAAAGACAAGGTCTCCCCAAGGGAGACAGCCATTTGGTTAGCCAAGAGTCTTAAAGGAATGATGTCTGACGAAAGTGGGGGCCGCTGTTCATGA	3132	0.4294	MESRMDQYEIMEQIGRGAFGAAILVNHKAEKKRYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRPTASEVLKHPYLQPYVEQYRPSFSPQTSCSPEKPVSSVNYSRRNMAESQNSNSSSSDRDSLMSHERHTATAVPECDNKATETDLASVDDDDSSEHLLPSEEENGGSHVSAKKAEQEVMKPSHNVHSSNIESKQPKTIRNIMMALKEGKLREATSPMRSNRIKAGAVSTPKINPETSSKLPKPNFAAPGLKPNLESPAVAHAKVSPDSAKRIQGSHPYKHQLLMIESSPKAKPRHDLTPPSGLVKQVEGDGVPAKPLQRTPPSLLRRPSFPARIRTAGLDIANVANDNGKLAPNRMAQEPETSHCQLTNGNVSHIPRQVAREPQRAFGRSSKGMQTDSSNSASSSVSIQGYELYDDATTFIDMREQILPDNESVTRSVGVESGQDSSSPASCSNCQKVEMVSNKTCGVPPNIQNTTSSSEKVNSKIVTDHPVEDPKIIFASEEGPPINHTNISSASVSDKKSVDPPAEAAEEIKGHLDISEEMMLTMSLKHPSQSSAEKPVCEVVPVSKLDNRTDVVSQPELVCKSPGDDKFTVRERLSSVAETIPPITTAKTSSHNVLQEKGTAMPNPTPERPDVGHLPAAFDDVIHVIRHSSYRVGSEQPVKESVEMGVQNLDVGKFINVVRDDLETRNVSSPLTLKCSEPTSTKPNTSDQLETRSITTPPTLKSPSFSDASSLKSSISDHPGFKEQDVSNPVSLVSESDSTELSKYNTLTTEEKPPPAKETLDVKSFRQRAEALEELLELSAELLQQNRLEELQVVLKPFGKDKVSPRETAIWLAKSLKGMMSDESGGRCS*	1044

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev04g2806	1043	PANTHER	SERINE/THREONINE-PROTEIN KINASE NEK	1	1026	-	-
	Aev04g2806	1043	MobiDBLite	consensus disorder prediction	883	963	-	-
	Aev04g2806	1043	MobiDBLite	consensus disorder prediction	547	594	-	-
	Aev04g2806	1043	Gene3D	Transferase(Phosphotransferase) domain 1	90	338	-	-
	Aev04g2806	1043	MobiDBLite	consensus disorder prediction	331	369	-	-
	Aev04g2806	1043	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	129	141	IPR008271	GO:0004672\|GO:0006468
	Aev04g2806	1043	ProSiteProfiles	Protein kinase domain profile.	8	262	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev04g2806	1043	MobiDBLite	consensus disorder prediction	578	594	-	-
	Aev04g2806	1043	MobiDBLite	consensus disorder prediction	690	711	-	-
	Aev04g2806	1043	MobiDBLite	consensus disorder prediction	883	970	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev04g2806	Aev-Chr4	27920971	27926972	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev04g2806	14	263	MAP Kinase Kinase Kinase	AT1G53570	31.765	1.57e-36	144

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	NEK	Aev04g2806		Pkinase	1.9e-65	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev04g2806	K08857		-	gmx:100818747	1498.03

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev10g2136	10	22025575	22030695	Aev04g2806	04	27920971	27926972	PCT

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