Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2799 ATGGCAACGTACTTTCATGGCGGCAGCAACAACAACAACAGTGGTTCAGAAATCCAATCCTCTGCTGAAGGGTTGCAGACACTTTACCTTTTGAACCCAAACTATGTACCTTTCTCTGACTCTGCTCACAACCCAACACAACACAACAACATCCTTTTCCTCAATCCCAATAATAACAACAATAGTACTAGTACTAGTGCTCCCACTCATCACCCCCACGCGCTCAACTTGACTGGTTTGTCTCACGCGCCACCACAACATCACCTTATTGGGGTCACTATTCCAGCTTCCAACATCATCGGATCCGCCAATAACTCTGAGGAAATCTCTGGTGGCTTCCATGGCTTTGCCATGGCGGCCGGAGCCCCTCGTGTCCACTACAACTTGTGGGGTTCAATGGATTCGATTAATGATCGAACCCCTTCATCTGCTGCTGCTGCAGGAGTCACAGTGGAAGCAACAACCTCGTCTAATAATTCAGGGTATGTTGGCACTGTGACAAGTTCGGCAGCAGCAGCAGAAATCGGGTTGTATAGGCCTGGTAGTGGCCTTCAACAAGGATTATCACTTAGTCTCTCTTCTCAGCACCCGAGTTTTAGGTCGTTCCCCGGCGAGATGGATGTCGTGTCTCCGGCGAGCCGTGGCGGTAATAATAATAATAATAATGGGGTTTCGAGTATCCATAGTGTTGTTTTGGGGTCCAAGTATCTGAAGGTGGCACAAGAGCTTCTTGATGAAGTTGTTAATGTGGGCAATAATAAGGGAATCTCTATAATTGAGGGGTCTTCTAGCAATAAAGAGAAGATGAAAGGGAATATAATTGTTGAATCGAGTTCTGTGGTTGGTGATGGATCGAGTGGTGGTGGAGGTGAAAATAATAGTGGTGCTAATAATAACAAACAAGGGGGAGAACTCAGCACAGCACAAAGACAAGAGCTTCAGATGAAGAAGTCCAAGCTTGTTAATATGCTTGATGAGGTGGAGCAAAAGTACCGAGAGTACAACCACGAAATGCAAGTAGTGATATCATCGTTCGAGCAAGGAGCAGGATATGGAGCAGCAAGATCATACACATGCCTTGCACTGAAGACAATCTCAAAGCAATTCCGGTGCCTTAAGGACGCAATCTCATCGCAGATAAGAGGAACGAGCAAGGCAATGGGCGAGGATGATGCTAGTTTCTTGGGAGGCAAGGCAGAGGGTAATAGCAGTTCGAGGCTTAGGTTTGTGGATCAGCATCTGAGACAACAGAGAGCACTTCAGCAGTTGGGAATGATCCCTCATCACCACAATGCTTGGAGGCCACAAAGAGGCTTGCCTGAAAGGGCTGTTTCCATTCTCCGGGCTTGGCTCTTCGAGCATTTCCTTCATCCGTATCCGAAGGACTCAGATAAGGTTATGCTGGCAAAACAAACTGGACTTACACGGAGCCAGGTATCAAACTGGTTCATAAATGCGAGAGTTCGGCTATGGAAACCAATGGTTGAAGAAATGTACTTGGAAGAAGTGAAGGATCACAACAATAGCATCACCACCTCCCATGATAACAACAACAACAATATTGCACAATCAAAATCAGAACCCTTCAACAACCAAAACACTACTACTACTTCTCCCACTGATATCTCAAACTCCAACACAATAATATCATCATCAATCTCTCCCAATATGGGAGGAGGAGGAGGAGGGCATTCTGGTAATTTCCTTCTGAGTCCAAACACTAGTAGTAAGCCTCAACAGAATTCTCCAAGTAGCATCCTTTCATCAGTGGACATGGATTCATCAATGAATCATAGTAGTAATAATAATAATAATGGAGAAGCCAATAATAACAATAATAATGTTATTGGTGGCTATGGATCCTCATTCTCTATAGAAGACATTGGAAGGTTTAATAATCATCATCATCAGCAACAATTGGGTCCAAGGTTCCATGGGAATGGTGTTTCTCTAACACTAGGACTACCACCTAGTGATCACAATAATCAACATGGTGGGTTTCTCTCACATAATAATAATATGCATTTGGGAGGGAACAATAATAATAATAGTGAGTTTTGTGCAATGAATAGTACTATTACTACTCCTCATCATCCACCCTCTTCTCATTCAGGTACAAGTTATGATAACATTGATATGCAAAATAGGAAGAGGTTTGCTGCTCAATTATTGAGGGATTTTGTGGCCTAA 2190 0.4379 MATYFHGGSNNNNSGSEIQSSAEGLQTLYLLNPNYVPFSDSAHNPTQHNNILFLNPNNNNNSTSTSAPTHHPHALNLTGLSHAPPQHHLIGVTIPASNIIGSANNSEEISGGFHGFAMAAGAPRVHYNLWGSMDSINDRTPSSAAAAGVTVEATTSSNNSGYVGTVTSSAAAAEIGLYRPGSGLQQGLSLSLSSQHPSFRSFPGEMDVVSPASRGGNNNNNNGVSSIHSVVLGSKYLKVAQELLDEVVNVGNNKGISIIEGSSSNKEKMKGNIIVESSSVVGDGSSGGGGENNSGANNNKQGGELSTAQRQELQMKKSKLVNMLDEVEQKYREYNHEMQVVISSFEQGAGYGAARSYTCLALKTISKQFRCLKDAISSQIRGTSKAMGEDDASFLGGKAEGNSSSRLRFVDQHLRQQRALQQLGMIPHHHNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEVKDHNNSITTSHDNNNNNIAQSKSEPFNNQNTTTTSPTDISNSNTIISSSISPNMGGGGGGHSGNFLLSPNTSSKPQQNSPSSILSSVDMDSSMNHSSNNNNNGEANNNNNNVIGGYGSSFSIEDIGRFNNHHHQQQLGPRFHGNGVSLTLGLPPSDHNNQHGGFLSHNNNMHLGGNNNNNSEFCAMNSTITTPHHPPSSHSGTSYDNIDMQNRKRFAAQLLRDFVA* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2799 729 MobiDBLite consensus disorder prediction 567 615 - -
Aev04g2799 729 MobiDBLite consensus disorder prediction 510 558 - -
Aev04g2799 729 Gene3D - 428 507 - -
Aev04g2799 729 Pfam Homeobox KN domain 450 489 IPR008422 GO:0003677|GO:0006355
Aev04g2799 729 CDD homeodomain 433 494 IPR001356 GO:0003677
Aev04g2799 729 SMART HOX_1 433 497 IPR001356 GO:0003677
Aev04g2799 729 MobiDBLite consensus disorder prediction 278 303 - -
Aev04g2799 729 SMART prehox3 225 378 IPR006563 -
Aev04g2799 729 Pfam Associated with HOX 230 377 IPR006563 -
Aev04g2799 729 ProSiteProfiles 'Homeobox' domain profile. 430 493 IPR001356 GO:0003677
Aev04g2799 729 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 13 681 - -
Aev04g2799 729 SUPERFAMILY Homeodomain-like 434 500 IPR009057 -
Aev04g2799 729 Coils Coil 310 344 - -
Aev04g2799 729 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 13 681 - -
Aev04g2799 729 MobiDBLite consensus disorder prediction 509 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2799 Aev-Chr4 27797035 27803873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2799 1 729 Homeobox Transcription Factor Family AT2G35940 39.187 3.61e-123 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aev04g2799 POX 2.1e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2799 - - gmx:100786883 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2127 10 21955105 21959273 Aev04g2799 04 27797035 27803873 PCT