Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2797 ATGAAGGACCCTGTGACAACAATAACAGGAATAACATATGAGAGGGAAAGTATTGAGCAATGGTTGCTTAAAGCCAAGGACTGCGTGTGCCCGGTAACAAAGCAGCCATTGCCTAGAAGCTTTCAATGCTTGACGCCGAACCACACCCTACGGAGGCTGATCCAAGGATGGACCTCGGCGAATGCATTGAAAGCTGGAGGCGTTGATCGAAGACATGATGATGATGATCCTATTGAGAAGTTACATGTCGTGAAACTTGTGAGGGATCTTGAGGTTCCTCAAAGGTATGAAAAGGTATTGGAGAAGATATGTGGTTTGGCTATGGAGAGTGAGAGGAACAGAACGTGCATGATTGAGGCTGGAGTTGCCAAAGCTATGGTTATGGTGATTAACAAGAGTTTCAAGGAAGGTAGAAACCGGACGAAAATCGTGGAAACCGGTGCCGTCACGGAACTCATCGAACTCGAGCTAGCTAAACCTACAAAGAACATTTCGGAACTCATATTCAACCTTCTAGCACATCTTTGTTCGTGTGCCGAAGGAAGAGAGAAATTCTTAAGGCACGCGGCGGGAATAGCTGTGGTTTCTAAGAGGATTTTGAGGGTTTCTTCGGCAACGGATGATCAAGCAATTCATATATTTTCAGTGATTGCTAAGTATTCGGCATCAAGTGAGGTTGTTCTTGAGATGTTGAGGGTTGGGGCAGTGTCCAAGCTTTGCATGGTGATGCAAGCGGATTGTGCTTCATATTTGAAAGAGAAAGTGAGAGGGATCCTTAGGTTGCATTCCAAAGTTTGGAATAATTCACCTTGTATACAAATTTATTTGTTGACTAGGAACCAAAGATGA 849 0.4429 MKDPVTTITGITYERESIEQWLLKAKDCVCPVTKQPLPRSFQCLTPNHTLRRLIQGWTSANALKAGGVDRRHDDDDPIEKLHVVKLVRDLEVPQRYEKVLEKICGLAMESERNRTCMIEAGVAKAMVMVINKSFKEGRNRTKIVETGAVTELIELELAKPTKNISELIFNLLAHLCSCAEGREKFLRHAAGIAVVSKRILRVSSATDDQAIHIFSVIAKYSASSEVVLEMLRVGAVSKLCMVMQADCASYLKEKVRGILRLHSKVWNNSPCIQIYLLTRNQR* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2797 282 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PUB24 129 279 - -
Aev04g2797 282 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PUB24 1 132 - -
Aev04g2797 282 PANTHER WDSAM1 PROTEIN 129 279 IPR045185 GO:0061630
Aev04g2797 282 PANTHER WDSAM1 PROTEIN 1 132 IPR045185 GO:0061630
Aev04g2797 282 Gene3D - 61 276 IPR011989 -
Aev04g2797 282 ProSiteProfiles U-box domain profile. 1 64 IPR003613 GO:0004842|GO:0016567
Aev04g2797 282 Pfam U-box domain 1 61 IPR003613 GO:0004842|GO:0016567
Aev04g2797 282 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 60 IPR013083 -
Aev04g2797 282 SMART Ubox_2 1 57 IPR003613 GO:0004842|GO:0016567
Aev04g2797 282 SUPERFAMILY ARM repeat 96 260 IPR016024 -
Aev04g2797 282 SUPERFAMILY RING/U-box 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2797 Aev-Chr4 27785923 27788334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2797 105 279 U-box Gene Family AT3G11840 44.886 3.51e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2797 - - gmx:100811293 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2126 10 21945465 21947125 Aev04g2797 04 27785923 27788334 PCT