Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2777 ATGCTAACCATAGTGACGGTTAGATGTGGGCATTGTGCCAATTTGCTGTCAGTTAACATGGTGGGAGGAGCATCTCTTCAACCATTTCCTCCTCAAGACCCTCAGTCACAGAAACAGCACCTAAGCTTTGAGGAATCAAGCAGCAAAGAAATGGGATCATCTTCAAAATGCAACAACAAAATAACACCATTTGAGTCTGTAGAGCATGAACAACCTACTAGGCTTCCTCCCATTCGTCCTCCTGAAAAGAGACAACGTGTTCCTTCTGCTTATAACCGGTTCATTAAGGAGGAAATCCAAAGGATTAAGGCCAGTAATCCAGATATCAGCCACAGGGAGGCTTTCAGCACTGCTGCCAAAAATTGGGCACATTTTCCTCATATTCACTTTGGATTAAAGCTGGATGGCAATAACAAGCAAGCAAAGTTGGACCAAGGGGAAGGAGCACACAAGTCTAATAATGGATTCTACTAA 474 0.4346 MLTIVTVRCGHCANLLSVNMVGGASLQPFPPQDPQSQKQHLSFEESSSKEMGSSSKCNNKITPFESVEHEQPTRLPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNNKQAKLDQGEGAHKSNNGFY* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2777 157 PANTHER PROTEIN YABBY 6-RELATED 1 157 IPR006780 GO:0007275
Aev04g2777 157 Gene3D High mobility group box domain 70 141 IPR036910 -
Aev04g2777 157 MobiDBLite consensus disorder prediction 29 66 - -
Aev04g2777 157 SUPERFAMILY HMG-box 77 125 IPR036910 -
Aev04g2777 157 Pfam YABBY protein 1 132 IPR006780 GO:0007275
Aev04g2777 157 PANTHER PLANT-SPECIFIC TRANSCRIPTION FACTOR YABBY FAMILY PROTEIN 1 157 - -
Aev04g2777 157 MobiDBLite consensus disorder prediction 27 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2777 Aev-Chr4 27615107 27621708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2777 1 157 C2C2-YABBY Transcription Factor Family AT1G08465 63.354 1.85e-63 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Aev04g2777 YABBY 2.2e-54 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2777 K25796 - zju:107410267 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2112 10 21842867 21850374 Aev04g2777 04 27615107 27621708 PCT