Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2776 ATGACTGATATAAGGAAGTGGTTCATGAAATCGCACGACAAGGGCAATGCCAATGCCTCCAAGCCTTCTACTGATAAACCCCAGCCCGAGAAACCGGCATCTGGAGGGCAAGAAAGTTCGGCACGGAGGAAAACTAGCAAATATTTTCCTACCGACAAACAAAAGGTGAAAGATGAAAAAGAAACGGCAGAGCTTCCTGCTAAACGAAAGAATATAAAGGACAACAATGAGGATGAAGATGATGGAGATGATTCTGTTTTGCTCGCAAATAAAAAGAAGTCAACTGGTGCCACTCCCACAAAGAAACTGAAGAGTGGATCCGGTAGGGGGATCCCCCAGAAATCAGTTGATTTGGAAGAAAGTGATGACGATGATGAGAAAGATGCTGCGACACCTGTTAAATCTGCTGGAAGGGGTCGCGGTGGAAGAGGTGCATCAGCACAATCAACTGGTGGGAGGGGTAGAGGTGGTGGTGGGGGTGGTAGAGGTGGATTCATGAATTTTGGAGAAAGAAAAGATCCTCCTCACAAAGGAGAAAAGGAAGTCCCTGAAGGTGCTCCTAACTGTTTAGCTGGTTTAACTTTTGTAATCAGTGGAACACTAGATAGTTTGGAACGAGAAGAAGCAGAAGATTTGATCAAACGCCATGGCGGCCGTGTCACTGGATCAGTCAGCAAGAAAACGAATTATCTGTTATGCGATGAAGATATTGGTGGACGGAAGTCTGCAAAAGCCAAAGAGCTAGGAACTTCGTTTCTCACAGAGGATGGATTGTTTGATATGATTCGGGCATCGAAACCTGCAAAAGCTTCTTCACAAGAAGAATCGAAGAAGCCTGTCAATAAGCCTATTGCTATAGCATCCCAGCCAAAATGTTCACCAAAAGCAGAAGCGAAGGTCTCTCTATCTTCACCCATACCGCCTACACAAGCTAAGCCAAAAATTGCAACTAAGCCAAAAATTGCAACTACTGCCCAGTCTTCTTTGATGTGGACAGAGAAATATCGACCTACAAATCCAAAGGATATCATAGGGAATCAGTCACTTGTTACACAGCTTCATAATTGGTTGAAAACATGGAATGAGCAATTTCTTGAAACTGGAAAAACAACTTCAGCGAAAGTAGTCTGTAAGGAGCTTGGTTTCCAGGCAATAGAGGTAAATGCTAGTGACAGCCGTGGAAAAGCTGATAGCAAAATTCAAAAAGGAATTAGTGGAAGCAATGCAAATTCTATCAAGGAACTTGTAACCAATGAAGCCCTTGGTGCAAATATGGATCGGTCAAAGCTTTCTAAAACTGTTCTCATCATGGATGAGGTTGATGGGATGTCAGCTGGTGATAGGGGTGGTGTTGCTGATCTAATTGCTAGCATCAAGATATCGAAAATTCCTATTATCTGCATTTGCAATGACCGTTACAGCCAAAAATTGAAAAGTCTTGTGAACTACTGTTTGCTTCTTAACTTCAGGAAGCCTACAAAGCAACAGATGGCAAAGAAGTTGATGGATGTTTCAAAGGCTGAAGGGCTTCAAGTTAATGAGATTGCTCTTGAGGAACTAGCAGAAAGAGTTAATGGAGATATGCGTATGGCACTGAACCAGTTACAATATATGAGCCTTTCCATGTCTGTCATTAACTATGATGATATTAGGCAGCGCCTTCTTACCAATTCGAAGGATGAAGACATTTCACCATTCACAGCTGTTGATAAGCTTTTTGGTTTTAATGCTGCGAAGTTGAAAATGGATGATAGGATTAATCTTAGCATGAGTGATCCTGATCTTATTCCTCTTCTTATCCAGGAAAATTATATTAATTATAGACCAAGCTTGGCTGGTAAGGATGACAGTGGTATAAAACGCATGAACCTGATTGCCCGTGCTGCTGAGTCTATTGCAGATGGGGATATTGTTAATGTACAGATTCGAAGATATCGACAGTGGCAGCTCTCTCAAACTAGTTCTCTTGCATCATCTATAATTCCTGCTTCATTGTTGCATGGGCAAAGAGAAATACTTGAACAGGGAGAACGGAATTTCAACCGGTTTGGTGGGTGGCTGGGGAAGAACTCGACAATGGGCAAAAACCTGAGGCTTATGGATGACCTACATATGCACATTCTTGCTTCACGTGAATCTAGTTCGGGGAGGGATACTCTTCGTTTGGAATACCATACTCTTTTCCTTAAACACTTGACAGAACCACTTCGAGTTCTGCCCAAGGCTGAAGCTGTTGAGAAAGTTGTGGAATTTATGAATACATACTCCATCAGTCAGGAAGATTTTGATACTATTGTCGAGTTATCAAAATTCAAGGGTCATCCTAATCCTCTAGAGGGCATAGCACCTGCAGTTAAGACAGCCTTGACCAAAGCATACAAAGAGCAGAGCAAATCTAGGATGGTTAGAGCTGCAGATCTAGTCAACCTTCCTGGTATAAAGAAGGCCCCTAAGAAGCGAATTGCTGCTATTCTAGAACCAGCCGAACCAGCTGAGGAAGGGGTTGAACAAGGTGAAGGTAACACATATGACGAGAGTGAAGAAGAGAACAAATCAGACTCAGACGAATTAGATGGCACCAATGCTGGCGAAAAGCTGCAGTCAGAACTTCAAAGTTTGAACTCAAAGGCAATGCAAGTACAATTGGAGCTGAAAGGAGCAGGAAATTCGAAGTCGAAGAAGGCATCTGGTGGTAAAGGTGCTTCTGCATCTGCACAGAAGGCTGGCCAAACCTCAAGGGCTACATCAAAAAGAAAAAGTGGTCAATGGTCCTGCATTGAGCCAATGATGGTCTACCGTTGGGACAGTGGTGGTTCAGCATTCGGACGACAATGGTCCAAACTGGTATGA 2850 0.4305 MTDIRKWFMKSHDKGNANASKPSTDKPQPEKPASGGQESSARRKTSKYFPTDKQKVKDEKETAELPAKRKNIKDNNEDEDDGDDSVLLANKKKSTGATPTKKLKSGSGRGIPQKSVDLEESDDDDEKDAATPVKSAGRGRGGRGASAQSTGGRGRGGGGGGRGGFMNFGERKDPPHKGEKEVPEGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSAKAKELGTSFLTEDGLFDMIRASKPAKASSQEESKKPVNKPIAIASQPKCSPKAEAKVSLSSPIPPTQAKPKIATKPKIATTAQSSLMWTEKYRPTNPKDIIGNQSLVTQLHNWLKTWNEQFLETGKTTSAKVVCKELGFQAIEVNASDSRGKADSKIQKGISGSNANSIKELVTNEALGANMDRSKLSKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLNFRKPTKQQMAKKLMDVSKAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVINYDDIRQRLLTNSKDEDISPFTAVDKLFGFNAAKLKMDDRINLSMSDPDLIPLLIQENYINYRPSLAGKDDSGIKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQTSSLASSIIPASLLHGQREILEQGERNFNRFGGWLGKNSTMGKNLRLMDDLHMHILASRESSSGRDTLRLEYHTLFLKHLTEPLRVLPKAEAVEKVVEFMNTYSISQEDFDTIVELSKFKGHPNPLEGIAPAVKTALTKAYKEQSKSRMVRAADLVNLPGIKKAPKKRIAAILEPAEPAEEGVEQGEGNTYDESEEENKSDSDELDGTNAGEKLQSELQSLNSKAMQVQLELKGAGNSKSKKASGGKGASASAQKAGQTSRATSKRKSGQWSCIEPMMVYRWDSGGSAFGRQWSKLV* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2776 949 Gene3D BRCT domain 162 264 IPR036420 -
Aev04g2776 949 MobiDBLite consensus disorder prediction 885 922 - -
Aev04g2776 949 Pfam Replication factor RFC1 C terminal domain 632 794 IPR013725 GO:0003689|GO:0005524|GO:0005663|GO:0006260
Aev04g2776 949 Gene3D - 564 673 - -
Aev04g2776 949 PANTHER CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 17 894 - -
Aev04g2776 949 CDD BRCT_RFC1 185 263 - -
Aev04g2776 949 MobiDBLite consensus disorder prediction 266 291 - -
Aev04g2776 949 CDD HLD_clamp_RFC 492 550 - -
Aev04g2776 949 SUPERFAMILY post-AAA+ oligomerization domain-like 563 708 IPR008921 GO:0003677|GO:0006260
Aev04g2776 949 MobiDBLite consensus disorder prediction 895 922 - -
Aev04g2776 949 MobiDBLite consensus disorder prediction 169 183 - -
Aev04g2776 949 Pfam BRCA1 C Terminus (BRCT) domain 187 262 IPR001357 -
Aev04g2776 949 SMART BRCT_7 187 265 IPR001357 -
Aev04g2776 949 Pfam ATPase family associated with various cellular activities (AAA) 367 458 IPR003959 GO:0005524|GO:0016887
Aev04g2776 949 MobiDBLite consensus disorder prediction 826 861 - -
Aev04g2776 949 Coils Coil 863 883 - -
Aev04g2776 949 Gene3D - 329 491 IPR027417 -
Aev04g2776 949 CDD AAA 367 455 - -
Aev04g2776 949 Gene3D - 492 562 - -
Aev04g2776 949 ProSiteProfiles BRCT domain profile. 185 266 IPR001357 -
Aev04g2776 949 MobiDBLite consensus disorder prediction 1 186 - -
Aev04g2776 949 SUPERFAMILY BRCT domain 185 266 IPR036420 -
Aev04g2776 949 MobiDBLite consensus disorder prediction 838 854 - -
Aev04g2776 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 329 552 IPR027417 -
Aev04g2776 949 PANTHER REPLICATION FACTOR C SUBUNIT 1 17 894 - -
Aev04g2776 949 MobiDBLite consensus disorder prediction 45 76 - -
Aev04g2776 949 PIRSF RFC1 2 898 IPR012178 GO:0003689|GO:0005524|GO:0005663|GO:0006260|GO:0006281
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2776 1 876 Core DNA Replication Machinery Family AT5G22010 66.238 0.0 1087
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2776 K10754 - gmx:100802809 1323.53