Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2739 ATGCCTTCTTCCTCACAAGAAATTATCCTCACCAGCTCACCAAATGGCCCCATCATGGCATATGAAGCTTCCAGCGGCGCCACCATCGCCCGGTTCACAGGAAGCCGGTCTCCATGTCGCGGCCTCACCATGGTTGGTCGGGGACTAATCGCAGCCTCCCACGTGTTCTCAGACACAGGTGCTGGCTCAATCCATATATACAACTGGTACACTCCAACTGTATTCCACAAGTTCACTGTCCCTGAGCCTGTCGCTCCACTAACTGCTACCTCTGATGGTGCCTTTCTCTTTGCCGGTGGCCTATCTGGGAGTATTCATTCCCTCTCACTTTCTTCCGGGGATGTGATCAAATCCTTTGTTGCTCACTCGAAACCCGTTTCTAGTCTCCAACTTAGCGATGATGGGTCCCTTGTGATTTCAGGTAGCAATGACGGAACCATTGTTGTGGTCCCAACTTATAGGCTTGTTGAAGCCTCACAACCATCCTCATCAGCTAGAGATGATGATCCAAAGGACTTGATCTTGCATCAGTGGAAGGCACATTCAGATTCGGTGACAGCTCTCAGCTCTGGGATAGGGTTGTGCGGCACTGCCATTGTTTCTTGCTCATTGGACTGCACGTGCAAGTTTTGGACCCTATCAGATGAAAGTCTCTTGCGCACAGTGGAATTTCCCTGTGCCATTTTCGGGGTTGCCTTAGAATCAGCAGAGTTAGGAATATTCTATGCTGCGGGTGCCGACGGTTTAGTTTACAAGGGATCCTTGAAGATTGAGAGCGAAAAACAAGGTCAAACCTGTAAAATGATCAGATTGTCTGAAAGCCATAGCGGATCGATTGTGTCTTTGCTTTTGATGAATTCGGGAAGGAACTTAGTTTCAGCTGCAGAGGATGGGAATGTTTCAATGTGGGATGTTGAGAAAGGGGAAGTCACTATGATTTTGGGGGATGAAATGGGAAGCATCAGTGACATGGTGGTGACGAGAGTAGGGACCATTGAGTGTGGGGTTAGAAAGGGAAACGACGGTGCCGATAAAGAAGCCATTGTCTTCACTTCTTATGAGCATTGTGATGAAGGGATGATCAAAACTCTGAAGGAAATCACAGAGATCGGTGATGTGATGGATTTGGTAGCAGAAGACAAGAAAAGGGCCATTGAACTGTTGGAATCAACAATAGGACTCTACGAGAGGCTCCTAAAACTTATCCTTAAGGAATCTATGAAAGCCATTAGTAGTTATATTAATGATGAGGAACAAGATGGTAGAGATAAGGACGGAGAAGAGAACAAAGGTCACAACCCTAAAATTCTCTCTCTCTCGCTTGCTCTGCCTCCAACTAACCCTTGCGTCTCCTGTCGCGCCACCGTCTTCCGCCATGTCGCGCCGCTGCGTCTTCCGTCGTGCCACCGTATTCCGCTGCATCGCGCCACCATTTTCGTCTTTCACCGCGTTGCGCCAATCGCTCCGTCTTCCGCCGCGTCTACTCGTGTTGTTGTTCCTCCTGCGATGCACCATTGTTTACTCCTTAGATCATTTACTACAACATTGGAAATCCTCAGTCTAGAGGTTCTTGCACTGTGTGACTATCCAGCTATTTTGGAGAAAACTGAAACACTGGCTTTGTTCAGGAGGAACAACAACACGAGTAGACGCGGCAGAAGACGGAGCGATTGGCGCAACGCGGTGAAAGACGAAAATGGTGGCGCGATGCAGCGGAATACGGTGGCGCGACGGAAGACGCAGCGGCGCGACACGGCAGAAGACGGTGGTGCAACAGGAGACGCAAGGGTTAGTTGGAGGCAGAGCAAGAGAGAGAGAGAGAGTTTTAGGGTTGTGACCTGTGAGTGA 1848 0.4935 MPSSSQEIILTSSPNGPIMAYEASSGATIARFTGSRSPCRGLTMVGRGLIAASHVFSDTGAGSIHIYNWYTPTVFHKFTVPEPVAPLTATSDGAFLFAGGLSGSIHSLSLSSGDVIKSFVAHSKPVSSLQLSDDGSLVISGSNDGTIVVVPTYRLVEASQPSSSARDDDPKDLILHQWKAHSDSVTALSSGIGLCGTAIVSCSLDCTCKFWTLSDESLLRTVEFPCAIFGVALESAELGIFYAAGADGLVYKGSLKIESEKQGQTCKMIRLSESHSGSIVSLLLMNSGRNLVSAAEDGNVSMWDVEKGEVTMILGDEMGSISDMVVTRVGTIECGVRKGNDGADKEAIVFTSYEHCDEGMIKTLKEITEIGDVMDLVAEDKKRAIELLESTIGLYERLLKLILKESMKAISSYINDEEQDGRDKDGEENKGHNPKILSLSLALPPTNPCVSCRATVFRHVAPLRLPSCHRIPLHRATIFVFHRVAPIAPSSAASTRVVVPPAMHHCLLLRSFTTTLEILSLEVLALCDYPAILEKTETLALFRRNNNTSRRGRRRSDWRNAVKDENGGAMQRNTVARRKTQRRDTAEDGGATGDARVSWRQSKRERESFRVVTCE* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2739 615 ProSiteProfiles Trp-Asp (WD) repeats profile. 119 149 IPR001680 GO:0005515
Aev04g2739 615 SMART WD40_4 112 151 IPR001680 GO:0005515
Aev04g2739 615 SMART WD40_4 171 212 IPR001680 GO:0005515
Aev04g2739 615 SMART WD40_4 265 304 IPR001680 GO:0005515
Aev04g2739 615 Gene3D - 170 329 IPR015943 GO:0005515
Aev04g2739 615 Gene3D - 2 164 IPR015943 GO:0005515
Aev04g2739 615 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 272 309 - -
Aev04g2739 615 PANTHER OS09G0477800 PROTEIN 1 412 - -
Aev04g2739 615 ProSiteProfiles Trp-Asp (WD) repeats profile. 272 313 IPR001680 GO:0005515
Aev04g2739 615 MobiDBLite consensus disorder prediction 550 608 - -
Aev04g2739 615 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 3 309 IPR011047 -
Aev04g2739 615 PANTHER WD-REPEAT PROTEIN 18 1 412 IPR045227 -
Aev04g2739 615 Pfam Neurobeachin beta propeller domain 86 340 IPR046851 -
Aev04g2739 615 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 119 149 - -
Aev04g2739 615 ProSitePatterns Trp-Asp (WD) repeats signature. 291 305 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2739 Aev-Chr4 27204690 27213651 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2739 99 307 U-box Gene Family AT1G04510 27.523 5.37e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2739 K14829 - gmx:100785191 472.626