LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev04g2735	ATGTCATCTAAGGTATCAATTTCACTTGGTCTTGAACCTTCTTCACTTTCAGGCTTATTCATCACTACAATCCTAAACACATTGATGATCTTCACAATAAGCCTAGTTGGTAGATTCTTAGGAGGTGCTAGCTTCAACCCTTCATCCACTATTACTTTCTACACTGCAGGACTAAGACCTGATTCATCACTTTCAACCATGGCTCTGAGGTTCCCTGCTCAAGCAGCAGGTGGTGCTGTTGGTGCTAAATCACTTCTTTTTGTGATGCCAACACAGTACAAACACATGCTGAAAGGTCCTCAATTGAAGGTGGATTTGCATACAGGAGCTATAGCAGAAGGGGCTTGTACTTTTACACTAAATTTGGCTGTCCTTATTATTATGCTAAAGGGTCCTAAAAACCCTTTTCTGAAGATGTATTTGATGGCTTTGACAACTTTGTGTTTGGTTATTCCTGGTTCTGCCTTCACAGGACCTGCTATGAACCCTGCTAATGCATTTGGTTGGGCCTATATGAACAATAGGCACAATAATTGGGAGCATTTTTATGTGTATTGGTTTGGTCCTTTTATAGGGGCAATCTCTGCTGCTTTTGTCTACAAGTTTCTGTTTGTCTCACAAGTTAAGCAGAAGAAAGCTTGA	642	0.4065	MSSKVSISLGLEPSSLSGLFITTILNTLMIFTISLVGRFLGGASFNPSSTITFYTAGLRPDSSLSTMALRFPAQAAGGAVGAKSLLFVMPTQYKHMLKGPQLKVDLHTGAIAEGACTFTLNLAVLIIMLKGPKNPFLKMYLMALTTLCLVIPGSAFTGPAMNPANAFGWAYMNNRHNNWEHFYVYWFGPFIGAISAAFVYKFLFVSQVKQKKA*	214

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev04g2735	213	Gene3D	Glycerol uptake facilitator protein.	1	212	IPR023271	-
	Aev04g2735	213	PRINTS	Major intrinsic protein family signature	26	50	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Aev04g2735	213	PRINTS	Major intrinsic protein family signature	66	85	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Aev04g2735	213	PRINTS	Major intrinsic protein family signature	183	203	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Aev04g2735	213	PRINTS	Major intrinsic protein family signature	143	165	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Aev04g2735	213	SUPERFAMILY	Aquaporin-like	17	206	IPR023271	-
	Aev04g2735	213	PANTHER	AQUAPORIN SIP1-1	2	213	IPR044222	GO:0015250
	Aev04g2735	213	PANTHER	MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER	2	213	-	-
	Aev04g2735	213	Pfam	Major intrinsic protein	26	200	IPR000425	GO:0015267\|GO:0016020\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev04g2735	Aev-Chr4	27165168	27165809	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev04g2735	23	204	Major Intrinsic Protein MIP	AT3G04090	48.901	1.78e-56	177

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev04g2735	K09875		-	gmx:100775829	296.975