Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2718 ATGGTTATTGTTGGCAAAAGGTTAATTTTTCTCTTGGTTTTGTGCTTATGGGAAGTGGTGGGGAAGACAGAACCATCATCTACCACTATGAATTCCTCTGTTTCTTCAAGACCTAATAAGGTTGTGAAGATTGGGGTCTTGTTTACGTTGAATTCTGTCATTGGAAGATCAGCTAAACCGGCCATTAATGCTGCCATTGAAGATGTTAATTCTAACTCAAGCATTCTCCCTGGCATTGAGCTGCAAGCTATTCTACATGACACTAAATGTAGTGGCTTTCTTGGAACAATGGAAGCTTTGCAGTTGATGGAGAATGATGTGGTTGCAGCTGTTGGACCACAGTCATCCGGAATAGCTCATGTCATCTCTCATGTGGTTAATGAGCTTCATGTACCTCTTCTATCATTCGGTGCAACCGATCCCACTCTATCTGCACTGCAGTACCCATACTTCGTCCGCACTACCCAGAGTGACTATTACCAGATGTATGCAATTGCTGACTTTGTTGAATATTTCAGATGGAGGGAAGTAATTGCCATTTTTGTAGATGATGATAATGGCAGGAATGGAATTTCTATTTTGGGCGACGCCTTGTCAAAGAAACGTGCCAAGATCTCTTACAAGGCTGCCCTCCCTGTTAATGCCACAAAAAGTGATATCAGTGATTTGTTAAATGACGTGAACTTAATGGAATCGAGGGTCTATGTTGTGCATGTTAATCCTGATTCTGGTTTGTTGATCTTTGATGTTGCAAAGCAGCTAAGGATGATGAGCAATGGCTATGTTTGGATCGCAACGGATTGGCTTCCTTCAGTTCTTGATTCGTTTCAGACACCAGACAGCGACACATTGGATCTTTTAGAAGGGGTTGTGGCTTTTCGCCATCACATTCCTGATACTGATCTCAGAAAGAGTTTCCTCTCTAAGTTGAAAAACCGGAAGGACAAGGAGACTTCAAGCTTCAATTCTTATGCATTTTATGCATACGATTCCGTTTGGTTAGCGGCTCGTGCACTTGATGTTTTTCTCAATGAAGGTGGGAATATATCTTTCTCCAGTGACCCTAGGTTGCGTGACACCAATGGAAGCATGCTGCGTTTAGGATCACTTCGTACCTTTGATGGTGGTCCTCAATTTCTGCAGACTATTTTGAGAACGAACTTTACTGGTCTGAGTGGTCAAATTGGGTTTGACACTGATAGGAATCTAATTCTTCCATCATATGATGTTCTAAATATTGGTGGATCCGGAAGCCGCAGAATCGGTTATTGGTCTAATCACTCTGGCCTCTCAGTTGTAGCTCCTGAGATTTTATATACACAATCAACCAGCAACTCTTCAACAAGCAATCAGCAATTGTACAGTGTGATATGGCCTGGAGATGCTACAACAACACCAAAAGGATGGGTGTTCCCTAACAATGGAAAGCCACTGCAAATCGGAGTGCCGAACCGAGTAAGCTACAAGGAGTTTGTTGCCAAGGACAAGAACCCTCCAGGAGTACAAGGCTTTTGCATTGATGTCTTTGAAGCAGCCTTAAACTTGTTGGCTTATCCTGTCCCAAGACAATATATTTTATATGGAAATGGCAAAAGGAATCCTAGCTATGATGAGCTTGTGGATCAAGTTGCACAAAATAACTTTGATGCAGCTGTTGGAGATGTTACGATTGTCACAAACAGGACAAGGTATGTGGATTTCACTCAACCTTTCATAGAATCAGGGCTTGTTGTTGTTGTTCCTGTCAAGGAGGAGAAATCAAGCCCCTGGTCTTTCCTCAAGCCATTTACTGCTCAGATGTGGTGTGTCACTGGTGCTTTCTTTCTTTTCGTGGGAACCGTCGTGTGGATTCTTGAGCACCGGATCAATCATGAGTTCCGTGGTCCACCAAGGAAGCAACTTATAACAGTCTTTTGGTTTAGTTTCTCAACAATGTTTTTCTCACATAGAGAGAACACTGTGAGTGCTCTTGGGCGATTGGTGCTACTCATATGGCTTTTCGTGGTGTTGATAATCAATTCGAGCTACACTGCTAGCTTGACTTCCATCCTCACCGTGCAGCAGCTGTCATCGCAAATCGAAGGGATTGATAGCTTGATCTCGAGTACTCTACCAATCGGAATTCAAGATGGCACATTTGTGCGGAAGTATCTGATAGATGAATTGAACGTAGCAGAGTCTAGGATAGTTACATTGAAGACCATGGAGGACTATATCGACGCTCTTCAGCGCGGCCCGAAATATGGAGGGGTAGCAGCAGTTGTCGAAGAGCTGCCTTATATTGAGATCTTGATGTCGAAAACTGACTGTAAGTTCAGAACTGTTGGGCAGGAGTTTACTAAAAGTGGCTGGGGATTTGCATTCCAGAGGGACTCTCCCCTTGCAGTAGACATGTCAACTGCCATTCTTCAACTCTCCGAAAACGGCGACCTGCAAAAGATCCACGACAAATGGCTTAACCAGAAGGATTGTGCAAACAATGATGTTGATTCTAACAAACTATCCCTGGCAAGTTTCTGGGGACTCTTTCTCATATGCGGCATTGCATGCGTAATTGCACTCATCGTGTTCTTCGCAAGAGTGTTCGGCCAATACACAAAGTTCAGCCCTGAGAATAATGAGGCTGATGAGGAGATTCAACCGGTAAAGCGTAGAAGGACAATGAAAACTACTAGCTTCAAGGACTTGATTGTATTTGTAGATAAAAAAGAAGCCGAAATCAAAGAGATACTTAGGCAGAAGAGTAAGAAAAGGAGATGCCAAAGCTTGGATGAGCAATCTAATTCAGTTTCACCAACCTAA 2802 0.4311 MVIVGKRLIFLLVLCLWEVVGKTEPSSTTMNSSVSSRPNKVVKIGVLFTLNSVIGRSAKPAINAAIEDVNSNSSILPGIELQAILHDTKCSGFLGTMEALQLMENDVVAAVGPQSSGIAHVISHVVNELHVPLLSFGATDPTLSALQYPYFVRTTQSDYYQMYAIADFVEYFRWREVIAIFVDDDNGRNGISILGDALSKKRAKISYKAALPVNATKSDISDLLNDVNLMESRVYVVHVNPDSGLLIFDVAKQLRMMSNGYVWIATDWLPSVLDSFQTPDSDTLDLLEGVVAFRHHIPDTDLRKSFLSKLKNRKDKETSSFNSYAFYAYDSVWLAARALDVFLNEGGNISFSSDPRLRDTNGSMLRLGSLRTFDGGPQFLQTILRTNFTGLSGQIGFDTDRNLILPSYDVLNIGGSGSRRIGYWSNHSGLSVVAPEILYTQSTSNSSTSNQQLYSVIWPGDATTTPKGWVFPNNGKPLQIGVPNRVSYKEFVAKDKNPPGVQGFCIDVFEAALNLLAYPVPRQYILYGNGKRNPSYDELVDQVAQNNFDAAVGDVTIVTNRTRYVDFTQPFIESGLVVVVPVKEEKSSPWSFLKPFTAQMWCVTGAFFLFVGTVVWILEHRINHEFRGPPRKQLITVFWFSFSTMFFSHRENTVSALGRLVLLIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISSTLPIGIQDGTFVRKYLIDELNVAESRIVTLKTMEDYIDALQRGPKYGGVAAVVEELPYIEILMSKTDCKFRTVGQEFTKSGWGFAFQRDSPLAVDMSTAILQLSENGDLQKIHDKWLNQKDCANNDVDSNKLSLASFWGLFLICGIACVIALIVFFARVFGQYTKFSPENNEADEEIQPVKRRRTMKTTSFKDLIVFVDKKEAEIKEILRQKSKKRRCQSLDEQSNSVSPT* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2718 933 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 328 340 - -
Aev04g2718 933 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 55 71 - -
Aev04g2718 933 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 115 143 - -
Aev04g2718 933 SUPERFAMILY Periplasmic binding protein-like II 454 821 - -
Aev04g2718 933 PIRSF IGluLR_plant 3 933 IPR017103 -
Aev04g2718 933 Gene3D - 61 405 - -
Aev04g2718 933 SUPERFAMILY Periplasmic binding protein-like I 37 470 IPR028082 -
Aev04g2718 933 Pfam Bacterial extracellular solute-binding proteins, family 3 488 820 IPR001638 -
Aev04g2718 933 PANTHER GLUTAMATE RECEPTOR 3.4 32 915 - -
Aev04g2718 933 CDD GluR_Plant 476 819 - -
Aev04g2718 933 SMART GluR_14 479 821 IPR001320 GO:0015276|GO:0016020
Aev04g2718 933 Gene3D - 589 712 - -
Aev04g2718 933 Pfam Ligand-gated ion channel 821 850 IPR001320 GO:0015276|GO:0016020
Aev04g2718 933 Gene3D - 713 824 - -
Aev04g2718 933 Pfam Receptor family ligand binding region 59 414 IPR001828 -
Aev04g2718 933 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 915 - -
Aev04g2718 933 Gene3D - 157 430 - -
Aev04g2718 933 CDD PBP1_GABAb_receptor_plant 43 434 IPR044440 -
Aev04g2718 933 Gene3D - 473 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2718 Aev-Chr4 26968148 26973187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2718 37 786 Ion Channels AT1G05200 69.067 0.0 1110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2718 K05387 - gmx:100802782 1495.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2718 04 26968148 26973187 Aev04g2718 04 26968148 26973187 ECH
Aev10g2082 10 21639590 21643380 Aev04g2718 04 26968148 26973187 PCT
Aev04g2718 04 26968148 26973187 Aev10g2083 10 21646561 21651143 PCT