Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2714 ATGTTTGAGTTGCTTAGGTGGGGCGGTCTCCGGTCATCTCGCGGAGATAACAGTGCACGGTTGGTGCAGTATCGACGGATACTGGATTTCATCTCTATGGATGGGTTCCAATGGACACCATATTCTGACATGGACGTGATGCAGATTGTTCCGGATCATGTCCAGCAGCACTCTGTGCTGTTTCGTTCAGTTATTCCCTTGCTTTCGTTCGAGATAGTAGAGTATCATCAGCCTGATCGTGTGTTGAGGCAGTTCCACATGATGCAGCATATCCCATCTCCTCCGGCTGACCTCAATCGCGTTCATGGCATTGATGGGAGAGGACAGTATCTTCAGTGGTGGTCCTTGAGTCCGTTTAGATATCTAGGCGGAGGTCCCCCTTGCCCAGACGAGATCCCTCCAGGGTGGCCTGATGGAGTTGGCCTTGGTGCAGGTCCTCAGATTCCACACCCACCAGCAGCCCCTGATAGGAGACGTGCACACACGAGAGCACGGACGGGCACACGTCAGAGCAGACGCCAGTACCCTATTGGGACTGCGGATGTGGGTGACTACTTTATTCTGCGCCAGACCCAGACTCAAACGCAATCGCAGACTCGGCCGCAGTCCCGGACTAGTACCCAGATACCACCGCAGTCCCAGTTGCCCCAGCAGTCGCATGTCGCACCGGATACGCAGACAGAGATGCACTTTGAGTCTAGGGTAGCTGCTGGAGGATCTATGTTTTTTGATGGATTATCGTCAGATTGGAGGAGTGGTCCTGGGCAGAGCTCGCGCGATGCACCTGGATCGAGCTCGCAGGCTGCAGCAGGGGGAGACGGTGATTGTTATAGGCCGACGATGGAGTCAGTGGACGATATTGGTATATCCATCACTGATGATGATCTTGATATGTTTGATGCATATCTTCGTCGACAGCTCCATAGCGGTGGCGATGAACTTACACCGTCATTTGCACAAAAATATCGAAGACGATTACCTAGTCAAATCAAATTGAAAACTCCGTCCGGAAAAGAATGGCAAATAAAATGTGCAAAAAGAGGTGACAAGGTATGGTTCACAGACGGTTGGAAGGATTTTGTACAACATTTTTCAATGTGTTATGGTTACACGGTATGGCTCCACTATGATGAAGAAAATACATTTGACGTTGAGATATTTGACGAAAATGAGGTTGAAGTCTCGTACGACTCTGAAGGAGATGAATGA 1209 0.5021 MFELLRWGGLRSSRGDNSARLVQYRRILDFISMDGFQWTPYSDMDVMQIVPDHVQQHSVLFRSVIPLLSFEIVEYHQPDRVLRQFHMMQHIPSPPADLNRVHGIDGRGQYLQWWSLSPFRYLGGGPPCPDEIPPGWPDGVGLGAGPQIPHPPAAPDRRRAHTRARTGTRQSRRQYPIGTADVGDYFILRQTQTQTQSQTRPQSRTSTQIPPQSQLPQQSHVAPDTQTEMHFESRVAAGGSMFFDGLSSDWRSGPGQSSRDAPGSSSQAAAGGDGDCYRPTMESVDDIGISITDDDLDMFDAYLRRQLHSGGDELTPSFAQKYRRRLPSQIKLKTPSGKEWQIKCAKRGDKVWFTDGWKDFVQHFSMCYGYTVWLHYDEENTFDVEIFDENEVEVSYDSEGDE* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2714 402 PANTHER B3 DOMAIN-CONTAINING 299 399 - -
Aev04g2714 402 SUPERFAMILY DNA-binding pseudobarrel domain 298 390 IPR015300 -
Aev04g2714 402 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR VRN1-LIKE 299 399 - -
Aev04g2714 402 Pfam B3 DNA binding domain 314 389 IPR003340 GO:0003677
Aev04g2714 402 MobiDBLite consensus disorder prediction 246 279 - -
Aev04g2714 402 CDD B3_DNA 316 388 IPR003340 GO:0003677
Aev04g2714 402 ProSiteProfiles B3 DNA-binding domain profile. 314 390 IPR003340 GO:0003677
Aev04g2714 402 MobiDBLite consensus disorder prediction 186 226 - -
Aev04g2714 402 Gene3D - 292 391 IPR015300 -
Aev04g2714 402 MobiDBLite consensus disorder prediction 139 227 - -
Aev04g2714 402 SMART B3_2 299 390 IPR003340 GO:0003677
Aev04g2714 402 Pfam Plant mobile domain 5 95 IPR019557 -
Aev04g2714 402 MobiDBLite consensus disorder prediction 250 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2714 Aev-Chr4 26918389 26920631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2714 318 400 B3 DNA Binding Superfamily AT3G18990 33.735 1.15e-12 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev04g2714 PMD 1.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2714 - - mesc:122724849 90.5077