Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2694 ATGGATCCGGAGCCTCTATGCGATTGTTGTGGTATTGTGAGAGCTGTGGTTTATTGCAAGTCAGATTCTGCACGGTTATGCTTGAGCTGTGATGGATGTGTACACTCAGCTAACTCTCTGTCATTTAGGCACCTTCGTTCTCTATTATGCGACATATGCAATTCGCAGCCAGCAATTGTTCATTGCTTGGAGGACAAGTTGTCTTTGTGCCAAGCTTGTGATTGGAACCAAAATGGGTGTTCCATGTTGGGACATCGTCGTCAGACTTTGGATTCTTACAAGGGTTGTCCCTTCTCCGAATCGCTTACTTTCATGCCCTTTGTGCTTGCTGGTTCTTCCTCAGTACATGGTTGTGGATCACATGATACACTGCCCAGAACTAGAAGTGATAGTTGCACTAGCAAGTGTTTGGAGCAACCAGATAATAACAATAACAATAACAACAATGGACTATTTGGTTTGGCGAGCGCTGATTTGAAAGAAACAAAAGAATGTATCAAATTTGAGCCTTGGATTGAGCAATCTTCTAGTTCCACCATTCCACCAAATCAAGACCACATTCCAAACAGCAGGGACCAAGCAATTTTCCTTCCTCAGGATGCCAACATGGCAGAGGAGTGTCTGGATTTCAACGATATAGGAATCCATGATGATGATGGTCTCAACATGGATAATTTTCAATTTGACTTTGAAAATAGTGATGAATTATTTGACTGTACTCAAATTGCCACAACGTACCAACTTGATAATGGAGGAATGAACTGTGAATTAATGGGAAATAACTTGTCCCTAACAGAATCTAATGCTCTTATTGAGAGTGCAATGGAGGCATCATCATTAGTCCAACAAGATTGTGTGGCTTTTCAGTCATCCAAGGCTGGTGGCTCAGCTAGTGAGATGCAGGGAATCAATAGTGATGCAAATTTACTTATGCCTCCTAGCTGCAATGGAAACAGCAATCTGGGATTTCCTGAGGGTCTAGTTCATTCAAGCATATCACTTCCATTTCCGAGTCTCACTGGTGAAGTTAGTGCCACTAACAATCAAGATTGTGAATTATCGTCGATGTTCCCAACAGGTGAGTTCTCTTGGAAACCAAATTCGAAGGCTGCATGCAAACAAGCCAGGGAAAAAGCTATAATGAGATACACTGAGAAAAGGAAAACTCGCAGGTTTGGTAAGCAAATAAGATATGAATCTCGCAAAGCAAGGGCTGATTCAAGAAAACGAGTGAAAGGTCTAAAGCCATGGGTCAAGCTGAAAGGTACCCGGGAAAGTGTAGGCCGGCTGGACCACAAGATCTTTAGTCTCAAGCCTAAAAGGCAAGGAGGCCGGAAGATCGGAATGTTCTCTAAGCTCATCAAGTTTAATGTTGATGGAAGAATAACCTCTATTGAAGCTCCAATTAGATATCTTCTTGTAAGGTTCTGA 1431 0.4228 MDPEPLCDCCGIVRAVVYCKSDSARLCLSCDGCVHSANSLSFRHLRSLLCDICNSQPAIVHCLEDKLSLCQACDWNQNGCSMLGHRRQTLDSYKGCPFSESLTFMPFVLAGSSSVHGCGSHDTLPRTRSDSCTSKCLEQPDNNNNNNNNGLFGLASADLKETKECIKFEPWIEQSSSSTIPPNQDHIPNSRDQAIFLPQDANMAEECLDFNDIGIHDDDGLNMDNFQFDFENSDELFDCTQIATTYQLDNGGMNCELMGNNLSLTESNALIESAMEASSLVQQDCVAFQSSKAGGSASEMQGINSDANLLMPPSCNGNSNLGFPEGLVHSSISLPFPSLTGEVSATNNQDCELSSMFPTGEFSWKPNSKAACKQAREKAIMRYTEKRKTRRFGKQIRYESRKARADSRKRVKGLKPWVKLKGTRESVGRLDHKIFSLKPKRQGGRKIGMFSKLIKFNVDGRITSIEAPIRYLLVRF* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2694 476 CDD Bbox1_BBX-like 6 49 - -
Aev04g2694 476 ProSiteProfiles Zinc finger B-box type profile. 45 90 IPR000315 GO:0008270
Aev04g2694 476 Pfam CCT motif 376 413 IPR010402 GO:0005515
Aev04g2694 476 ProSiteProfiles Zinc finger B-box type profile. 2 49 IPR000315 GO:0008270
Aev04g2694 476 SMART bboxneu5 2 49 IPR000315 GO:0008270
Aev04g2694 476 SMART bboxneu5 50 90 IPR000315 GO:0008270
Aev04g2694 476 PANTHER CCT MOTIF FAMILY PROTEIN-RELATED 4 413 - -
Aev04g2694 476 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 413 - -
Aev04g2694 476 ProSiteProfiles CCT domain profile. 376 418 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2694 Aev-Chr4 26735036 26741174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2694 4 413 C2C2-CO-like Transcription Factor Family AT3G21880 34.867 5.95e-63 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev04g2694 CCT 7.8e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2694 - - ahf:112737556 469.929