Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2662 ATGGTTAGAACACCTTCATGTGACAAAAGTGGATTGAGGAAAGGAACTTGGACTCCTGAGGAAGATAAGAAGCTAATTGCTTATGTTACTAGATATGGTAGCTGGAATTGGCGCCAATTGCCTAGGTTTGCAGGTTTGGCTAGGTGTGGGAAGAGTTGCAGATTGAGGTGGATGAATTACCTAAGGCCTAACCTCAAAAGAGGGAACTTCAATCAAGAAGAAGAAGATATTATCATCAAATTGCACACAAAGCTTGGCAATAGATGGTCTGCCATTGCTGCTCAATTACCTGGTAGAACAGATAACGAAATAAAGAACCATTGGCACACCACACTCAAGAAGCGGTTTCAACAAAACAAAGCCCCAAATGAAGAACAACCCAAATCATCAACCACCACCCCAGAAAACGATCACTCTGTTCCCAATAAAAATTCCCAAATCTCAGACATCATCGCAGCCCCATTTTCACCAATTTCATCATCTTCCTCGAGTGAATTCTCATCATCCATAACTTCTTCTTCAGATCACAGTCTCACCAATGGAAACTTGTTGATTGAAGACGATGACTTTTCCTTTCTTGATGGAAGTTTCTGGACAGAGCCATATCTTGCTGAAATTTTATCCACTACTCCAACAAGTGATAATAATAATAATAATCAAGAATGTGTTGACTTTGGTCAAAGCTCACAAGATACGACCACAACGACACAGATGTTTGATGCTTGTGCAAGTTTGGTTGATCTTGGTGAGAACGAGTTTGGGAGCTGCAGCTTCATGCTTGATGGTAATAATCATGAGTCACAAAAAACAGAGCAAATGATTGAGAGCTTTTGGACTCAGCCTTACGTGTCTTATGCTGACGTGTACCACGTTCCATCTGAATACTTTTCACCACTCTGTGGGGCTGATCTTTGGACCACTACTACTCAAAATAATACTATGTATGATGAACACCTTAGCTTGTTCTAA 969 0.4066 MVRTPSCDKSGLRKGTWTPEEDKKLIAYVTRYGSWNWRQLPRFAGLARCGKSCRLRWMNYLRPNLKRGNFNQEEEDIIIKLHTKLGNRWSAIAAQLPGRTDNEIKNHWHTTLKKRFQQNKAPNEEQPKSSTTTPENDHSVPNKNSQISDIIAAPFSPISSSSSSEFSSSITSSSDHSLTNGNLLIEDDDFSFLDGSFWTEPYLAEILSTTPTSDNNNNNQECVDFGQSSQDTTTTTQMFDACASLVDLGENEFGSCSFMLDGNNHESQKTEQMIESFWTQPYVSYADVYHVPSEYFSPLCGADLWTTTTQNNTMYDEHLSLF* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2662 322 CDD SANT 69 112 IPR001005 -
Aev04g2662 322 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Aev04g2662 322 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev04g2662 322 SMART sant 13 63 IPR001005 -
Aev04g2662 322 SMART sant 66 114 IPR001005 -
Aev04g2662 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Aev04g2662 322 CDD SANT 16 61 IPR001005 -
Aev04g2662 322 Gene3D - 69 143 - -
Aev04g2662 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Aev04g2662 322 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev04g2662 322 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 230 - -
Aev04g2662 322 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev04g2662 322 Gene3D - 6 67 - -
Aev04g2662 322 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Aev04g2662 322 MobiDBLite consensus disorder prediction 122 143 - -
Aev04g2662 322 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 230 - -
Aev04g2662 322 MobiDBLite consensus disorder prediction 114 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2662 Aev-Chr4 26370574 26372431 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2662 1 205 MYB Transcription Factor Family AT1G06180 49.756 1.74e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev04g2662 Myb_DNA-binding 5.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2662 K09422 - gmx:778184 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2035 10 21395226 21397110 Aev04g2662 04 26370574 26372431 PCT
Aev04g2662 04 26370574 26372431 Aev10g2034 10 21389140 21389888 PCT