Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2661 ATGGTGAGAACGCCCTCCAAAGACAAAAGTGGACTGAGGAAAGGAACTTGGACTCTTGAGGAAGATATGAAGCTAATTGCTTATGTCACTAGGTATGGCTGCTGGAATTGGAGTCTTCTCCCCAAGTTTGCAGGTCTGGCTAGGTGTGGGAAGAGTTGCAGATTGAGGTGGCTGAATTATCTTAGGCCTGATCTCAAAAGGGGGAACTTCACTCAAGAAGAAGAAGATACTATCATTAGATTACACACAAAGCTTGGTAATAGGTACAATCTCATGCAATGGTCTGTCATTGCCTCTAATTTACCGGGAAGAACAGATAATGAAATCAAGAACCATTGGCACACCGCACTGAAGAAGCGGTTTCAAGAACAAAAGGTTGTCACAAAAAAAGAAGCTAAACTTTCCAAATTAAAAGATTATAATGAACCCAAGCCACAAGTGGAATTGATACAGAACAAAGGTATTCTTCCAGCTATTTCCCGGAATTCAGTTAGCAGTAGTACACCATCATCAAGTAACCACAATTTTTCGGTGCTGATGGAAGATGATGAATTTGCTTTTCTTGATGCAGACAGAACAGAGCAGACAGAAATAGGAGCAGAGAATAATGACTCTGCCTTTTTTGATTCTCACATAGAAACAATGATTGAAAATTTTTGGTCGGAGCCATATAAGGTTGATATGTCACACATTCCAAATGAATATTCTTCCATGGTGAATGATGATGATCTTTGGAGTCGAAGTAATTTGTATGATGAAGAACATATTAGATTGTTTTAA 780 0.3897 MVRTPSKDKSGLRKGTWTLEEDMKLIAYVTRYGCWNWSLLPKFAGLARCGKSCRLRWLNYLRPDLKRGNFTQEEEDTIIRLHTKLGNRYNLMQWSVIASNLPGRTDNEIKNHWHTALKKRFQEQKVVTKKEAKLSKLKDYNEPKPQVELIQNKGILPAISRNSVSSSTPSSSNHNFSVLMEDDEFAFLDADRTEQTEIGAENNDSAFFDSHIETMIENFWSEPYKVDMSHIPNEYSSMVNDDDLWSRSNLYDEEHIRLF* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2661 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Aev04g2661 259 Gene3D - 68 145 - -
Aev04g2661 259 CDD SANT 69 115 IPR001005 -
Aev04g2661 259 CDD SANT 16 61 IPR001005 -
Aev04g2661 259 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 233 - -
Aev04g2661 259 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev04g2661 259 SMART sant 13 63 IPR001005 -
Aev04g2661 259 SMART sant 66 119 IPR001005 -
Aev04g2661 259 Gene3D - 14 66 - -
Aev04g2661 259 SUPERFAMILY Homeodomain-like 11 113 IPR009057 -
Aev04g2661 259 Pfam Myb-like DNA-binding domain 67 116 IPR001005 -
Aev04g2661 259 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev04g2661 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 121 IPR017930 -
Aev04g2661 259 ProSiteProfiles Myb-like domain profile. 62 117 IPR001005 -
Aev04g2661 259 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2661 Aev-Chr4 26358085 26359860 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2661 1 135 MYB Transcription Factor Family AT1G06180 61.481 8.34e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev04g2661 Myb_DNA-binding 2.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2661 K09422 - gmx:100777621 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2661 04 26358085 26359860 Aev04g2661 04 26358085 26359860 ECH
Aev10g2034 10 21389140 21389888 Aev04g2661 04 26358085 26359860 PCT