Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2660 ATGGTGAGAGCTCCTTTCTATGACAAAAATGAATTGAAGAAAGGAGCTTGGAGTAGAGAAGAGGATGAGAGGTTAAGAGCTTTTGTTCAGAAATATGGTCATTCCAATTGGCGCCAGCTCCCAAAGTTTGCAGGAAATGAGCTCAAATCCAAGTCAGATGATTCTCCTAGAGTTAAAACAACTAATCAGTTCATAACAGAATCTGAAAGCCTTTCTGTTTTAGAAAGCTCATTACCCATTTCAACAGAAACAACTTCCTACACTGAAGAAGAACAGAATGATGCCCAATCCCTTACCTCCAATGTTGCACAATCAATCATGAATTGCCCCAGATTGAAAGAAGATCATAGTGTGGTACTTCCGTCGGTAACATATGAAAAATTTAGTGGAGATTTTTGGACTGAACCATTCTTAGTGGAAGGTGCATATATTGATGATGAGATAATAAGTAGTGGTGGTGATGTCGCACCTCGCATCGCATGCCATCCTCAAAGTCGCAGATTCCTCGCAGTCGCACGTCATCCCTCGCAGGTCGCAGCAGCCGCACGCCCTCCCTCGGCGCACTCTGCTTCCTCTACTACTGCTGCTGCACCTCTGGCACCTCTGTTGTTGCTTCTGCCGGTTGCTGCTACTGCTGCTTGGCTTGCTTTTCTGCCTACTGCTGCTGCTTGGCCTGCTTCTGCCACTTGCTGCTACT 697 0.4591 MVRAPFYDKNELKKGAWSREEDERLRAFVQKYGHSNWRQLPKFAGNELKSKSDDSPRVKTTNQFITESESLSVLESSLPISTETTSYTEEEQNDAQSLTSNVAQSIMNCPRLKEDHSVVLPSVTYEKFSGDFWTEPFLVEGAYIDDEIISSGGDVAPRIACHPQSRRFLAVARHPSQVAAAARPPSAHSASSTTAAAPLAPLLLLLPVAATAAWLAFLPTAAAWPASATCCY 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2660 232 Pfam Myb-like DNA-binding domain 14 49 IPR001005 -
Aev04g2660 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 68 IPR017930 -
Aev04g2660 232 PANTHER MYB TRANSCRIPTION FACTOR 1 52 - -
Aev04g2660 232 CDD SANT 16 51 IPR001005 -
Aev04g2660 232 Gene3D - 11 64 - -
Aev04g2660 232 SUPERFAMILY Homeodomain-like 12 62 IPR009057 -
Aev04g2660 232 SMART sant 13 66 IPR001005 -
Aev04g2660 232 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 52 - -
Aev04g2660 232 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 57 147 - -
Aev04g2660 232 ProSiteProfiles Myb-like domain profile. 9 64 IPR001005 -
Aev04g2660 232 PANTHER MYB TRANSCRIPTION FACTOR 57 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2660 Aev-Chr4 26343154 26347907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2660 1 45 MYB Transcription Factor Family AT5G10280 57.778 6.41e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev04g2660 Myb_DNA-binding 1.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2660 K09422 - gmx:100776043 87.8113