Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2659 ATGTCAGAAACACATGATACACGCTTGGTGCCCGAATATGACACTATTTATACTCAGGAATTTTCTCTTTGTTTCTTTGAGTTGATTTGTGCTGTTAAACTTAGCTTTTTGGGGTCAGAAAAACTTGTTCCCAGCAAGATGGTGAGAGCTCCTTATTTTGATGAGAAAGGAATAAAGAAAGGTGCATGGAGTGAGGAAGAGGACAAGAGGCTTATTGCTTACATTCAGAGACATGGTCATCCCAATTGGCGTCAACTTCCAAAATTCGCAGGTTTGGCAAGATGTGGAAAGAGTTGCAGGCTTCGTTGGATGAATTACCTGCGACCAAATGTAAAACGAGGGAACTACACCGAAGAAGAAGAGCAAATAATCATCGATTTGCATAAACAACACGGAAACAATCTTAGTGTATTGCAACGTCTGTATATGCTTCGTATGTCAGAAGGCTCATCGGTGAAAACTCACATAGCTGAGTTTACATCACTTGTAACCGAGCTGAAAAATATGGGTGAGACATTCTCCGGAGAGCAATGA 534 0.4101 MSETHDTRLVPEYDTIYTQEFSLCFFELICAVKLSFLGSEKLVPSKMVRAPYFDEKGIKKGAWSEEEDKRLIAYIQRHGHPNWRQLPKFAGLARCGKSCRLRWMNYLRPNVKRGNYTEEEEQIIIDLHKQHGNNLSVLQRLYMLRMSEGSSVKTHIAEFTSLVTELKNMGETFSGEQ* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2659 177 CDD SANT 62 107 IPR001005 -
Aev04g2659 177 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 111 IPR017930 -
Aev04g2659 177 Gene3D - 53 113 - -
Aev04g2659 177 Pfam Myb-like DNA-binding domain 60 107 IPR001005 -
Aev04g2659 177 Pfam gag-polypeptide of LTR copia-type 129 176 - -
Aev04g2659 177 PANTHER MYB TRANSCRIPTION FACTOR 47 138 - -
Aev04g2659 177 SUPERFAMILY Homeodomain-like 61 136 IPR009057 -
Aev04g2659 177 SMART sant 59 109 IPR001005 -
Aev04g2659 177 SMART sant 112 162 IPR001005 -
Aev04g2659 177 ProSiteProfiles Myb-like domain profile. 55 107 IPR001005 -
Aev04g2659 177 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 47 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2659 Aev-Chr4 26332407 26335846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2659 47 138 MYB Transcription Factor Family AT5G16770 65.217 1.48e-40 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev04g2659 Retrotran_gag_2 5e-09 CL0523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2659 K09422 - gmx:100782270 177.178