Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev04g2642 | ATGTTTCTGAAATCTCGTATCAATTCAGCTACTTCCATATTGCCTATTACACTGCCCACCTTTAGCATAGCGCTCTCTATAGTGATTCTCATCACTCTCTCACAAATCCCCAAACCTATCAAAAAGAAAAACAAAAGACAATTCTTTTTCTCCCTTCTCAATCAACTGTTGAAAGCACTCATGGTTGAGTCATTGTTCCGGCTTCGCAGTGGAATCGGAGCGACAAGGAATGGATCGGAACAAAGTCGTTGGGCCAACATGCCACAAGAATTGCTGAGAGAGGTGCTCGCGAGAGTGGAAGCGTCTGAGGCAACGTGGCCGCAGCGAAAGAGCGTGGTGGCTTGTGGTGGAGTGTGCCGCGCTTGGAGGCACGCCGCAAACGACGTCGCTATACCTCCTGCAGTTTCTTCCAGGATAACCTTCCCCATCTCTCTCAAACAGCCTGGCCCAAGGGAGCATCTATTCCAGTGCTTCATTAAGCGCAACCGGAACGCCCAAACATATCATTTGTTTCTCAGTTTAAATAATGGCGCAATAGTTGCTGATGGGAAGTTCCTTCTGGCTGCACGAAAGTATAGACGCCCCACTTGCACGGATTATGTTATCTCTATAAACTCTGATGATGCATCAAAGGGAAGCAACGCCTGTGTTGGGAAACTGAGATCAAATTTTCTGGGAACAAAGTTCACAGTCTATGATGATCAACTTCCTCATACAAGAGGAGCAAATATCACAAAAAGTCGCTCCAATAGGCTGATGAATCTTAAACGAGTTTCGCCCAAGGCCCCTACGGGCAGCTATCCTGTAGCCCACATCTCGTATGAATTGAATGTGCTAGGCTCAAGTTGCTCCGTTCTGCCACCGCTGCAGCTAAAGCTTCAGTTTTTTTTGTTCTGCTTCTGGTTCAATTTTGCTTATGCTTCCGGTTCGCGTTCTGATTTTGGTTCTCATACTGCTTCTGCTTATAGATCTGGTTCGCGTTTTGCTTCTGGTCTGCTCCAGCTTATTGGTTCTACTTGTGCTTCCTAG | 1029 | 0.4665 | MFLKSRINSATSILPITLPTFSIALSIVILITLSQIPKPIKKKNKRQFFFSLLNQLLKALMVESLFRLRSGIGATRNGSEQSRWANMPQELLREVLARVEASEATWPQRKSVVACGGVCRAWRHAANDVAIPPAVSSRITFPISLKQPGPREHLFQCFIKRNRNAQTYHLFLSLNNGAIVADGKFLLAARKYRRPTCTDYVISINSDDASKGSNACVGKLRSNFLGTKFTVYDDQLPHTRGANITKSRSNRLMNLKRVSPKAPTGSYPVAHISYELNVLGSSCSVLPPLQLKLQFFLFCFWFNFAYASGSRSDFGSHTASAYRSGSRFASGLLQLIGSTCAS* | 343 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev04g2642 | 342 | Pfam | F-box domain | 84 | 128 | IPR001810 | GO:0005515 | |
Aev04g2642 | 342 | PANTHER | TUBBY-LIKE F-BOX PROTEIN 9 | 75 | 282 | - | - | |
Aev04g2642 | 342 | SUPERFAMILY | Tubby C-terminal domain-like | 133 | 282 | IPR025659 | - | |
Aev04g2642 | 342 | SUPERFAMILY | F-box domain | 77 | 128 | IPR036047 | GO:0005515 | |
Aev04g2642 | 342 | PANTHER | TUBBY-RELATED | 75 | 282 | - | - | |
Aev04g2642 | 342 | Pfam | Tub family | 145 | 281 | IPR000007 | - | |
Aev04g2642 | 342 | PRINTS | Tubby superfamily signature | 266 | 293 | IPR000007 | - | |
Aev04g2642 | 342 | PRINTS | Tubby superfamily signature | 200 | 216 | IPR000007 | - | |
Aev04g2642 | 342 | PRINTS | Tubby superfamily signature | 216 | 240 | IPR000007 | - | |
Aev04g2642 | 342 | Gene3D | - | 84 | 131 | - | - | |
Aev04g2642 | 342 | Gene3D | Tubby Protein; Chain A | 142 | 285 | IPR025659 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev04g2642 | Aev-Chr4 | 26205402 | 26212922 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev04g2642 | 66 | 281 | TUB Transcription Factor Family | AT2G47900 | 59.389 | 1.26e-92 | 280 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | TUB | Aev04g2642 | Tub | 2.2e-42 | CL0395 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev04g2642 | K19600 | - | gmx:100778346 | 310.842 |