Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2601 ATGGGTTGCATATGTTCAAAGAGTTCAGCTGTGGAAGACAGCAGGGAAAGTATCACCAACAAATTCTCATCATCTAGCACCAGGCCGTCGGAGGTGAACGTTTTGCGGCTGCACTCGTCAAAAAGGGTTGAGGGGGTTCGGGTTAAAGATACGCAGTTAGATGGTAATGATGTGAAGGTTTCATTAATTGACAAGAAAGCCAATGGTTCTGTTGAGTTGTATGATGATGAAATTGTGAGGAAGAAAATTGAGAAGCCCGAATTGACTGTTATTGATCATCCTGGTATTGGAAGGGTTCCGAAGGCTACAGAGGGAGAGCAAGTTTCAGCAGGATGGCCAGCTTGGCTTTCTTCCGTTGCTGGTGAAGCTATCAAGGGATGGATCCCAAGGAGTGCAAATACATTTGAAAGGCTACACAAAATTGGGCAAGGAACTTACAGTACTGTTTACAAGGCACGAGATGTGATTAATCAAAAGATTGTTGCCTTGAAGAGGGTGCGTTTTGACAATCTTGATCCTGAGAGTGTCAAGTTTATGGCAAGGGAAATCCTTGTTCTGCGTAGGCTAAACCATCCTAACATAATAAAGTTGGAGAGCTTGATAACTTCACAGACATCTCGCAGCTTGTACCTCGTTTTTGAGTATATGGAGCATGATCTCACAGGACTTGGATCAAATCCAGCCATTAAATTTTCTGAACCACAGCTGAAATGCTACATGCAGCAACTTCTTAGTGGATTGGATCATTGTCATAGTCATGGTGTCCTCCATCGTGATATAAAGGGGTCAAATCTTCTCATTGACAATAATGGTGTCTTGAAGATTGCGGATTTTGGTTTGGCTAGTTTTTTCGATCCCCATCTCAGTGTTCCATTAACAAGCCGTGTAGTGACTTTGTGGTATAGACCTCCAGAACTTTTACTCGGAGCAAATCACTATGGAGTGGCAGTGGATTTGTGGAGCACTGGTTGCATATTGGGAGAACTATATACTGGCAGGCCCATATTGCCAGGAAAAACAGAGGTTGAACAGTTGCACCGGATTTTTAAACTTTGTGGCTCACCATCTGAGGACTATTGGCTTAAATTGCGGTTGCCACCTTCAACAGTATTCAAGCCTCCACACCATTACAGGCGATGCATTGCAGACACATTCAAGGATCATCCTCCTGCTGCTGTGAAGCTTATAGAGACCCTACTATCTTTAGATCCAACACATCGAGGGACAGCAGCTGCTGCTCTCAAAAGTGAGTTCTTTGCAACAGATCCCCTGGCTTGTGATCCATCAAGTTTACCAAAATATCCTCCCAGCAAAGAAATTGATGCTAAATTGCGGGATGAAGCAATGAGAAGGCAAGGAGCTGCCGGAGGTAGGGAGCAAAAGGTTGCCCCAACTGTTAGACAAGAAAAAGGACCTAGAACACATGTCACAGCAAAAGACAATGCTGACCCAGGCATATCAGTGCAGCAAGGGCAACATTATTCCTTTTCAAAGAACCGGAGTGACTTGTCTAACCCTCACAGAGAACATGTGTCTGGGGTTCTGGTTTTCCCACACAAGCATTTAGAAGATGTCAAAGAAATGGGAAATAATTTCTCTCGGCATCTCTATAAGAGGCCTTCGCATTCGGGTCCGTTGGTTCCTGGTTCTGGCTGGGAAAGGGGTGGGAAGGAAGTTGATGAGGGGCCTAATGTTTCTAACAGAGTGAACCTTTCAAAATTATCCGGGCTAGTGGCTTCTAGGACACAGGTATCTGAAGATCAGGAGGTAAAACCAGTTCAGTTGCACCACCGAAAACCGGTTGAAATAAGATCAGTGGAGGTGACTGATGGATCAGAGTCACGAAGAAGGCATGATCAAAAGCGGATTGCTGATCTCAGCCAAATTGGACATAGAAGGGGCCCCACAGAAAAATCAACTCCGGATGGGCATGGATCCAGAGGAAACAAGATATATCTTTCAGGTCCACTACTGGCTTCATCAAACAACTTGGATCAGATGCTCAAAGAGCATGATCGAAAGATCCAGGAGATTTCGAGACGAGCGAGAATCGACAAGTCAAGAGCAAGAGGTGAGAAAGTTCGTGCACATCGAAAGTAG 2100 0.4481 MGCICSKSSAVEDSRESITNKFSSSSTRPSEVNVLRLHSSKRVEGVRVKDTQLDGNDVKVSLIDKKANGSVELYDDEIVRKKIEKPELTVIDHPGIGRVPKATEGEQVSAGWPAWLSSVAGEAIKGWIPRSANTFERLHKIGQGTYSTVYKARDVINQKIVALKRVRFDNLDPESVKFMAREILVLRRLNHPNIIKLESLITSQTSRSLYLVFEYMEHDLTGLGSNPAIKFSEPQLKCYMQQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASFFDPHLSVPLTSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTEVEQLHRIFKLCGSPSEDYWLKLRLPPSTVFKPPHHYRRCIADTFKDHPPAAVKLIETLLSLDPTHRGTAAAALKSEFFATDPLACDPSSLPKYPPSKEIDAKLRDEAMRRQGAAGGREQKVAPTVRQEKGPRTHVTAKDNADPGISVQQGQHYSFSKNRSDLSNPHREHVSGVLVFPHKHLEDVKEMGNNFSRHLYKRPSHSGPLVPGSGWERGGKEVDEGPNVSNRVNLSKLSGLVASRTQVSEDQEVKPVQLHHRKPVEIRSVEVTDGSESRRRHDQKRIADLSQIGHRRGPTEKSTPDGHGSRGNKIYLSGPLLASSNNLDQMLKEHDRKIQEISRRARIDKSRARGEKVRAHRK* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2601 699 Gene3D Phosphorylase Kinase; domain 1 122 217 - -
Aev04g2601 699 SUPERFAMILY Protein kinase-like (PK-like) 128 424 IPR011009 -
Aev04g2601 699 PANTHER CYCLIN-DEPENDENT KINASE 1 685 - -
Aev04g2601 699 ProSiteProfiles Protein kinase domain profile. 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g2601 699 MobiDBLite consensus disorder prediction 674 699 - -
Aev04g2601 699 MobiDBLite consensus disorder prediction 450 506 - -
Aev04g2601 699 MobiDBLite consensus disorder prediction 605 644 - -
Aev04g2601 699 MobiDBLite consensus disorder prediction 605 657 - -
Aev04g2601 699 Gene3D Transferase(Phosphotransferase) domain 1 218 457 - -
Aev04g2601 699 MobiDBLite consensus disorder prediction 463 477 - -
Aev04g2601 699 MobiDBLite consensus disorder prediction 674 691 - -
Aev04g2601 699 MobiDBLite consensus disorder prediction 483 501 - -
Aev04g2601 699 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Aev04g2601 699 PANTHER CELL DIVISION PROTEIN KINASE 1 685 - -
Aev04g2601 699 SMART serkin_6 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g2601 699 Coils Coil 661 681 - -
Aev04g2601 699 Pfam Protein kinase domain 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g2601 699 CDD STKc_CDK9_like 135 419 - -
Aev04g2601 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2601 Aev-Chr4 25722676 25729730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2601 127 484 Core Cell Cycle Gene Families AT5G10270 46.257 1.21e-109 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Aev04g2601 Pkinase 3.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2601 - - gmx:100814156 1123.61