Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2572 ATGCAAGTGAGTCATTTAGTTTCAATATGTACAAGTTTTGCATTGTCTCAGGGTCTAAGTAAGGAATACATGATGGAGGAGGAAGCATTGCTCGGGCAAGCCGAGATTTGGAAGCACATGCTGAGCTTCTACGACTCTGTGGCGCTGAAATGCGCCGTCGAGCTTCGCATAGCCGACATAATAGACGGCCACGGCGAACCAATTCCCCTGTCCACGATTCTCGATGGCATCCAAGATGCCCCCTCCCCTGATATCTCCTTGCTCCAAAGGGTCATGACAGTGTTGGTCCGCAAAAACATTTTCAGCTCTAAACAATCAGAAATCGGAGGAGACACACTCTTTGGCCTCACACGTGCCTCTAAATGGATCCTACGTGAGACAAAGATGACTCTAGCACCAATGATTCTCCTTGAGAACCATCCAATTCATCTCAACCCTGCACACTACATGAGTGTGTGTATAAGGGAAGGGACAAAGAATGGCACGGCATTTTTTAGGTGTCATGGTCATGAGCAATTTGATATGACTGCTTTGGACCCTGAATTTAATAGGTTGTTCAATCAGGGCATGTTTTGTACTGCTAGGATTGTGTCCAAGGCTGTGATTGCAGGGTACAAAGATGGGTTTGAAAAGATTGAGTCTTTGGTTGATGTGGGTGGCGGAATTGGTGGGTCACTTTCTGAGATTGTCGGAGCTTTCCCTCATATCAAAGGTATTAACTTTGATTTGCCTCATGTTGTTGCTACGGCACCAAAGTATGATGGAATCACCCATGTTGGAGGGGACATGTTCGTCTCTGTTCCTCAAGCTGATGCTATTTACATGAAGTGGATTTTGCATGACTGGAGCGACGAAAACTGCATCAAGCTTTTGAAGAACTGCAGGAAGGCAATACCAGAGAAGACAGGGAAGGTGATAATTGTTGACCATGTTCTGCAGCCACAAGGGAACGATGGGCTATTTGATGACACTGGCTATGCATTTGACATCATGCTTCTTGCACACAACGGTGATGGAAAAGAAAGGACCGAGGAGAATTGGAAATTGCTTTTTAAAGAAGCTGGGTTCCCTCGTTATAACATCATCAAAATCCAGGCTCTCACATCCATCATTGAGGCTTTTCCAATTTGA 1131 0.4536 MQVSHLVSICTSFALSQGLSKEYMMEEEALLGQAEIWKHMLSFYDSVALKCAVELRIADIIDGHGEPIPLSTILDGIQDAPSPDISLLQRVMTVLVRKNIFSSKQSEIGGDTLFGLTRASKWILRETKMTLAPMILLENHPIHLNPAHYMSVCIREGTKNGTAFFRCHGHEQFDMTALDPEFNRLFNQGMFCTARIVSKAVIAGYKDGFEKIESLVDVGGGIGGSLSEIVGAFPHIKGINFDLPHVVATAPKYDGITHVGGDMFVSVPQADAIYMKWILHDWSDENCIKLLKNCRKAIPEKTGKVIIVDHVLQPQGNDGLFDDTGYAFDIMLLAHNGDGKERTEENWKLLFKEAGFPRYNIIKIQALTSIIEAFPI* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2572 376 CDD AdoMet_MTases 215 312 - -
Aev04g2572 376 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 37 375 IPR016461 GO:0008168
Aev04g2572 376 Pfam O-methyltransferase domain 153 356 IPR001077 GO:0008171
Aev04g2572 376 PANTHER O-METHYLTRANSFERASE 26 375 IPR016461 GO:0008168
Aev04g2572 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 373 IPR029063 -
Aev04g2572 376 SUPERFAMILY "Winged helix" DNA-binding domain 25 126 IPR036390 -
Aev04g2572 376 Gene3D - 19 123 IPR036388 -
Aev04g2572 376 PANTHER (R,S)-RETICULINE 7-O-METHYLTRANSFERASE-LIKE ISOFORM X1 26 375 - -
Aev04g2572 376 PIRSF O-mtase 15 376 IPR016461 GO:0008168
Aev04g2572 376 Pfam Dimerisation domain 48 96 IPR012967 GO:0046983
Aev04g2572 376 Gene3D Vaccinia Virus protein VP39 125 376 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2572 Aev-Chr4 25472159 25477278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2572 47 362 Monolignol Biosynthesis Gene Families AT5G54160 38.438 8.13e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2572 K22588 - gmx:100800801 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2572 04 25472159 25477278 Aev04g2572 04 25472159 25477278 ECH