Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2564 ATGAATTTTTCTGAGGCCACCATGGATCGTAAGAAGAAAGTGAACGCAAGAGAAGAACATGAAGTTCTCTTGAAACCAGTATGTGCTGAGCGTCTATTCCAGCTCACACGTGAATTGGGACTCAAGACTCATGGAGAAACAATTGAATGGCTATTGAACCATGTTGAGCCCTCTATTGCTGCAACAAAAGGCAAGGGAATATCATCATCATCTTCTATACCTTCTTCTGTTGTTATTAATGCATCATCAACGTTATGTGAAGATAAGAATGATGTTTATGAAGACGTGGAGCGTGAAAGAGGGATGTTTTGTCAAAAATGGATATAG 327 0.3945 MNFSEATMDRKKKVNAREEHEVLLKPVCAERLFQLTRELGLKTHGETIEWLLNHVEPSIAATKGKGISSSSSIPSSVVINASSTLCEDKNDVYEDVERERGMFCQKWI* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2564 108 PANTHER TRANSCRIPTION FACTOR PCF1-LIKE 6 78 - -
Aev04g2564 108 Pfam TCP family transcription factor 7 76 IPR017887 -
Aev04g2564 108 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 6 78 IPR005333 GO:0003700
Aev04g2564 108 ProSiteProfiles TCP domain profile. 7 62 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2564 Aev-Chr4 25380066 25380392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2564 9 86 TCP Transcription Factor Family AT5G41030 46.154 5.77e-17 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aev04g2564 TCP 9.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2564 - K16221 ahf:112736155 83.9593