Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2563 ATGATTTCTGGAGCTGAGAAGCAAATGGGGTGTTGTGTCTCGACAAGCAGTAAGAGTACTTGTAGCAGCAGGAGCAATGGAGAGATGATGACCTCTCCTTCTTGCTTAGAAGTCGTGTTGTGTCGGCAAAAGAGAGCGAGGAGAACCTTCTCTGATCATGTTCTTTCCCTGCACCATTTGCCATCCTTACCCAGCAGGATCTTCACTAATGGGAAGAGTCGCACCTCTTGCATATTTACGCAGCAGGGTCGTAAGGGTATTAATCAAGATGCCATGGTTGTGTGGGAAGATTTCATGTCTGAAGATATGACCTTTTGCGGTGTCTTTGATGGCCATGGTCCACACGGTCATCTAGTTGCGCGCAAAGTGAGAGATGCCTTGCCTTTAAAACTGCTCTCATCTCTGCATTCCGGTGAATCTAAGCGAAAGGGATCAGGTAAAACTTGCTTCAAGGGGAACATAAAACCTGAAAATGGAGACCTTCAGAAGGATTTAATATCTGCTGAGGATAAACTGAATTCTACATGGAGAGAAGCTTTCTTGAAGGCGTACAAGGCTATGGACAAAGAGCTCAGGTCTCATCCAAATTTGGACTGCTTCTGTAGTGGGAGCACAGCTGTCACTATAGTGAAGCAGGGTTCAAATCTGTTCATGGGATATATTGGCGATTCTCGAGCAGTCATGGGATCCAAAGACAGCAATGACTCCATGGTGGCAATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGAGAAGCAGAAAGAATTAAAAGGTGCAAGGGAAGGGTGTTTGCTTTGCAAGACGAGCCGGAAGTGCCTAGGGTATGGTTGCCTTTCGATGATGCACCGGGATTAGCAATGGCTAGAGCATTTGGAGATTTCTGTTTGAAAGAGTATGGTGTGATTTCCATACCTGAATTTTCTCACCGGCTGCTAACTGACAGAGATCAATTCATTGTTCTTGCCTCTGATGGGGTCTGGGATGTTTTAAGCAACGAAGAGGTTGTTGAGATAGTATCTTCAGCACCATCGCGATCATCAGCTGCGAGGATTCTGGTAGATGCCGCTGCTCGGGAATGGAAACTCAAATACCCTACTTCAAAGATGGATGACTGTGCTGTGGTCTGCCTATTTCTGGATGGAAAAATGGACTCAGAATCCGATTATGATGAACAATGTTATTCTTCTGCAACTATTCATAGCAACCATTCAGGCAATCCAATCGAGTCAGACGACGGACAGAAATCTGAGCCATCTTTGCAAAGGAACTTCACCGTTAGATCCTCAGAAGAAAATGCGGCCAACGGAACGCAACCCTCGGAAGTTGAGGATGGAACACCATCAGCTGATGATCAAAATTGGTCAGGTTTGGAAGGAGTCACCCGTGTAAACTCACTGGTCCAACTCCCTAGATTTTCTGAGGAAAGGCCAAACTCATGA 1443 0.4567 MISGAEKQMGCCVSTSSKSTCSSRSNGEMMTSPSCLEVVLCRQKRARRTFSDHVLSLHHLPSLPSRIFTNGKSRTSCIFTQQGRKGINQDAMVVWEDFMSEDMTFCGVFDGHGPHGHLVARKVRDALPLKLLSSLHSGESKRKGSGKTCFKGNIKPENGDLQKDLISAEDKLNSTWREAFLKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPSRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQCYSSATIHSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENAANGTQPSEVEDGTPSADDQNWSGLEGVTRVNSLVQLPRFSEERPNS* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2563 480 Gene3D - 67 388 IPR036457 -
Aev04g2563 480 CDD PP2Cc 81 380 IPR001932 -
Aev04g2563 480 ProSiteProfiles PPM-type phosphatase domain profile. 75 380 IPR001932 -
Aev04g2563 480 PANTHER ALPHABET, ISOFORM E-RELATED 9 468 - -
Aev04g2563 480 SMART PP2C_4 64 378 IPR001932 -
Aev04g2563 480 SUPERFAMILY PP2C-like 67 382 IPR036457 -
Aev04g2563 480 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 9 468 - -
Aev04g2563 480 Pfam Protein phosphatase 2C 145 357 IPR001932 -
Aev04g2563 480 MobiDBLite consensus disorder prediction 401 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2563 Aev-Chr4 25368516 25371923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2563 9 480 PP2C-type Phosphatase Gene Family AT1G03590 69.520 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2563 - - adu:107477895 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2563 04 25368516 25371923 Aev04g2563 04 25368516 25371923 ECH
Aev10g1995 10 21184036 21186435 Aev04g2563 04 25368516 25371923 PCT