Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2550 ATGGCTGTACATACAAAATTGCGTCTTATTGCTTACTCTGAAGAGATTGTAGATGGGCAACCAATTTATGCTTCTTCAAACTGTCTTCCTGTCAAGGCTTTGAAATTTGAACCAGCAGGTCATGCCTTCCATTCTGCCGCGCTTAAACTCCTTGGTGTTCAGGAAAATAATGAAGCTGATAATAAAAAAGTAGTTGATGATAAGGAACAAACATACTTTTCATCCGATTCTTATAGCACCAAGAGCAAAAAGAAATCTGGTACTGGAGACAAGCAGCAAGATCACTATGCTTTGTTGGGCCTGAGTCATCTAAGGTATCTTGCGACAGAGGATCAAATACGCAAAAGCTACCGTGAAACTGCCTTGAGATTTCATCCTGACAAACAGGCTGCTCTGCTTCTTGCTGAGGAAACTGAAGCTGCAAAGCAGGCAAAGAAAGATGAAATCGAGAGCCACTTTAAGGCAATCCAGGAAGCATATGAGGTTTTGATTGATCCTTTGAAGAGAAGAATTTATGATTCCACCGATGAGTTTGATGATGAGATTCCAACTGACTGTGCTCCACAAGACTTCTTCAAGGTGTTTGGTCCTGCTTTTATGAGGAATGGGCGGTGGTCAGTAAGTCAACCAATTCCATCACTAGGTGATGATGACAGCCCAATAAAAGAAGTTGATAATTTCTACAATTTTTGGTGGTACTCCTTTAAAAGTTGGAGGGAGTTTCCCCATGCTGATGAGTTTGATCTTGAGCAAGCTGAATCTCGAGACCATAGGAGGTGGATGGAAAGACAGAATGCAAAACTATCTGAGAAAGCTAGGAAGGAAGAGTATGCTCGGATACGTTCTCTTGTTGATAATGCTTACAAGAGAGACCCAAGGATATTAAGAAGGAAGGAAGAGGAGAAAGCTCAGAAGCAAAGGAAAAAAGAGGCTAAAATCCAGGCAAAGAGGATGCAGGAAGAAGAAGCAGCCCGAATTGCAGAAGAGGAGAGGCGACGCAAGGAGGAGGAAGAGAAACGAGCTGCAGAAGCTGCTTTACAACAGAAAAAGGTGAAGGAGAAAGAGAAAAAACTCTTGCGGAAGGAGCGAACACGGCTTCGAACTCTTTCTGCACCCTTACTGTCTCAACATTTACTTGGTATTTCTGATGATGATGTGGAGAAGCTTTGCATGTCGCTTGATACTGAGCAGCTGAGAGGTTTATGTGATAAAATGGAAGGCAAAGAGGTCTTGGAGCAGGCAGAAGTTGTAAGAGATGCACTGAGTTGTAAGAAATATGAGGCAGATAGGAAGGAGGAGAAAACCATTCAACAAAATGGTTCTACCAAAGCTAATGGCATTGCTTCTTTTAGCAACATTGAGAAGAAGGAGAAACCTTGGACTAAAGAAGAGATTGATCTATTGAAGAAAGGAATGCAAAAATATCCCAAAGGAACTTCACGGAGATGGGAGGTTATTTCTGAATACATCGGTACTGGAAGATCTGTGGATGACATTATGAAGGCAACTAAAACAGTTCTCCTCCAGAAGCCGGATACTTCCAAAGCTTTTGATGCATTTCTTGAGAAAAGGAAACCTGCCGCACAATCAATTGCTTCCCCTCTGACAACCAGAGAAGAAGTAGAAGGGGCATCGGCTTCTGCAAAGCCTGAAAGTAGTGCTGCCACCGCATCAAATAACTCAGAAGACTCTAGTACAAAAATTACAGATACCCAGAACCCTACTGCAAATGGAGTTTCCTCTAGTTCAGATCAAGACGTGTGGTCTGCAGTGCAGGAAAGGGCCCTGGTTCAAGCTTTGAAAGCCTTCCCAAAGGAAACCAATCAGCGATGGGAACGAGTAGCAGCAGCTGTCCCTGGGAAAACTGTGAATCAGTGCAAGAAGAAATTCACTTTGATGAAGGAGAGTTTCAGGAGCAAAAAGAGTGCAGTTTAA 1935 0.4284 MAVHTKLRLIAYSEEIVDGQPIYASSNCLPVKALKFEPAGHAFHSAALKLLGVQENNEADNKKVVDDKEQTYFSSDSYSTKSKKKSGTGDKQQDHYALLGLSHLRYLATEDQIRKSYRETALRFHPDKQAALLLAEETEAAKQAKKDEIESHFKAIQEAYEVLIDPLKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVSQPIPSLGDDDSPIKEVDNFYNFWWYSFKSWREFPHADEFDLEQAESRDHRRWMERQNAKLSEKARKEEYARIRSLVDNAYKRDPRILRRKEEEKAQKQRKKEAKIQAKRMQEEEAARIAEEERRRKEEEEKRAAEAALQQKKVKEKEKKLLRKERTRLRTLSAPLLSQHLLGISDDDVEKLCMSLDTEQLRGLCDKMEGKEVLEQAEVVRDALSCKKYEADRKEEKTIQQNGSTKANGIASFSNIEKKEKPWTKEEIDLLKKGMQKYPKGTSRRWEVISEYIGTGRSVDDIMKATKTVLLQKPDTSKAFDAFLEKRKPAAQSIASPLTTREEVEGASASAKPESSAATASNNSEDSSTKITDTQNPTANGVSSSSDQDVWSAVQERALVQALKAFPKETNQRWERVAAAVPGKTVNQCKKKFTLMKESFRSKKSAV* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2550 644 CDD SANT 588 634 IPR001005 -
Aev04g2550 644 Gene3D - 578 644 - -
Aev04g2550 644 Gene3D - 452 510 - -
Aev04g2550 644 SUPERFAMILY Homeodomain-like 458 502 IPR009057 -
Aev04g2550 644 Pfam DnaJ domain 94 173 IPR001623 -
Aev04g2550 644 CDD SANT 459 501 IPR001005 -
Aev04g2550 644 SUPERFAMILY Chaperone J-domain 92 200 IPR036869 -
Aev04g2550 644 SMART sant 456 509 IPR001005 -
Aev04g2550 644 SMART sant 584 636 IPR001005 -
Aev04g2550 644 SMART dnaj_3 93 168 IPR001623 -
Aev04g2550 644 PANTHER DNAJ DOMAIN, MYB-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 1 642 - -
Aev04g2550 644 ProSiteProfiles Myb-like domain profile. 580 634 IPR001005 -
Aev04g2550 644 Coils Coil 295 364 - -
Aev04g2550 644 MobiDBLite consensus disorder prediction 295 340 - -
Aev04g2550 644 ProSiteProfiles SANT domain profile. 583 638 IPR017884 -
Aev04g2550 644 CDD DnaJ 94 165 IPR001623 -
Aev04g2550 644 MobiDBLite consensus disorder prediction 528 587 - -
Aev04g2550 644 ProSiteProfiles Myb-like domain profile. 452 507 IPR001005 -
Aev04g2550 644 PRINTS DnaJ domain signature 117 132 IPR001623 -
Aev04g2550 644 PRINTS DnaJ domain signature 99 117 IPR001623 -
Aev04g2550 644 PRINTS DnaJ domain signature 148 168 IPR001623 -
Aev04g2550 644 SUPERFAMILY Homeodomain-like 586 640 IPR009057 -
Aev04g2550 644 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 642 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Aev04g2550 644 ProSiteProfiles dnaJ domain profile. 94 176 IPR001623 -
Aev04g2550 644 MobiDBLite consensus disorder prediction 549 587 - -
Aev04g2550 644 ProSitePatterns Nt-dnaJ domain signature. 153 172 IPR018253 -
Aev04g2550 644 Pfam Myb-like DNA-binding domain 458 499 IPR001005 -
Aev04g2550 644 Pfam Myb-like DNA-binding domain 587 630 IPR001005 -
Aev04g2550 644 Gene3D DnaJ domain 77 186 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2550 Aev-Chr4 25292910 25294844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2550 95 295 C2H2 Transcription Factor Family AT1G74250 28.750 2.38e-18 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev04g2550 DnaJ 4.2e-17 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2550 K09522 - gmx:100806665 935.25