Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2532 ATGCAGGTTAGGATTTTTTCCATGATGGATGATCAAGTCATAGATGGCATTTGTGGAAGGCTGAAGCTAAAGATATTCATTGAAGAAAGCAAAATTTTGTATCCTGGTAGTCCAATTGAGAAGATGATTTTCATTATTCGTGGAAAAATGGAGAGCACTGAGGACAAAACTACGGTTTCCTTATCAGCAGGAGATATTTGTGGTGAGGAGCTTCTCACATGGTGTCTAGAAAAGTATTCACTGAACAGAGATGGTAGAAAAGTAAGGATTTCTGGTCAGAGACTGCTCAGCAATAGAACAATTAGATGTTTAACTAATGTAGAAGCATTTGCACTACAATTAGCTGATCTTGAAGAAGTCACTAGCCTTTTCGCAAGATTTTTGCGGAATCATCGTGTTCAAGGAGCTATAAGGTATGAATCACCTTACTGGAGGGCCTTTGCAGCAAAACACATTCAAGTAGCATGGAGATATTGGAAGAGACGTCAAACGCGTGAACATTCGTCCCATCAAATTATTGATCAAATTTAG 531 0.3861 MQVRIFSMMDDQVIDGICGRLKLKIFIEESKILYPGSPIEKMIFIIRGKMESTEDKTTVSLSAGDICGEELLTWCLEKYSLNRDGRKVRISGQRLLSNRTIRCLTNVEAFALQLADLEEVTSLFARFLRNHRVQGAIRYESPYWRAFAAKHIQVAWRYWKRRQTREHSSHQIIDQI* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2532 176 CDD CAP_ED 5 120 IPR000595 -
Aev04g2532 176 Gene3D Jelly Rolls 3 126 IPR014710 -
Aev04g2532 176 ProSiteProfiles cAMP/cGMP binding motif profile. 5 72 IPR000595 -
Aev04g2532 176 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 2 168 - -
Aev04g2532 176 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 20, CHLOROPLASTIC-RELATED 2 168 - -
Aev04g2532 176 SUPERFAMILY cAMP-binding domain-like 2 129 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2532 Aev-Chr4 25153568 25157754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2532 2 163 Ion Channels AT2G24610 40.588 6.21e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2532 K05391 - qsu:112012074 236.498