Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2529 ATGACAGTTTCTTCCTTCTTCATCAGAGCTTCTAACGCTCTCAAAAGATACCCTTCATCATCCAAGCTTCTGCTTCTCTGCACTCTCAGTGGCGGAGGTGTAGTGGCATACTCGGAATCACAATCAGAAACTGAACGCCCTATTATAGAAGCTAATAAGGCCCCAAAGAAGAAAGTGGTGGTTCTTGGAACAGGATGGGCTGGTACCAGTTTCCTTAAGGATCTGGATGCTTCGTTATACGATGTTCAGGTTGTTTCACCTCGTAACTACTTTGCATTTACTCCCTTATTACCCAGTGTCACTTGTGGGACAGTTGAAGCACGGAGCATTGTCGAGCCGGTCCGAAACATCATAAAAAAGGGAAAAGGAGAAATAAAATATTGGGAGGCAGAATGTGTCAAGATTGATGCTGCAAACAAGAAGGTTTTTTGTCAGTCCAATATTGACAACTTAGTAGGAAGTGGCGAATTTTTTTTGGACTATGACTTCTTGGTTCTAGCAGTAGGAGCACAAGTAAATACTTTTAACACACCCGGTGTCGAGGAGAACTGTCATTTTCTGAAGGATGTTGAGGATGCTAAGAAGATCCGACTGTCCATCACAGATTGCTTTGAGAAGGCTGTACTTCCTAGTCTATCCGAAGAAGAGCGAAGATCAAATCTTCATTTTGTAGTCGTTGGAGGGGGTCCAACTGGTGTTGAATTTGCTGCAGAGCTGCATGATTATGTCACTGAAGATTTAATGAAGTTATATCCAGATGTTAAAGATATGGTGAAGATAACATTGATTCAATCAGGAGATCACATCCTGAACATGTTTGATCAAAGAATAAGTGCATTTGCCGAGCAGAAGTTCACAAGAGATGGCATTGACGTTTTAACAGGATGTCGCGTTGTCAATGTTAGTGACAAAGAAATTACTATGAAGGTGAAATCAACAGGAGAGGTTTGCTCTGTGCCTCACGGATTGATTGTCTGGTCCACTGGCGTGGCACTATTCAGTCGTAAGGATTTCATGGAAGAAATCGGTCAGGGTAAAAGACGTGTGCTAGCAACCGACGAATGGTTGCGAGTACAAGGAGTTGAAGATGTCTATGCCATTGGTGATTGTTGTACAATAAATCAACGTAAAGTCATGGATGATATCTCAGCCATATTTACGGCCGCAGACAAAGATGATTCTGGAAACTTAACTTTTGAAGAATTCCAGGATGTTATGGGTGACATCATGTTAAGATATCCGCAAGTCGAACTCTATTTGAAGAGCCGACATCTTCTTGATTTATCCACTCTGTGGGATTTACTAGGGAATGAAAGAAAGGAAATAGACATAGAAGCTCTTAAGCTGGCTCTTTCTAGAGCAGATTCACAGATGAAGAGTCTCCCAGCAACTGCACAGGTTGCTGCTCAACAGGGTGCATATCTGGCAAGATGCCTCAACCGCATGGATCATTGCGAAGAGCATCCTGAAGGTCCTCTGCGATTTAGAGGAACTGGACGTCATAAGTTTCTTCCCTTCCAGTATAAGCATTTCGGGCAATTCGCTCCTCTTGGTGGGGAGCAGGCAGCTGCAGAACTTCCTGGAGATTGGGTTTCCATTGGTCACAGCACTCAATGGCTTTGGTATTCTGTATATGCAAGCAAACAAGTGAGCTGGCGCACAAGGGTGTTGGTAGTATCTGATTGGACGAGAAGATTCATATTTGGGAGGGACTCAAGTAGAGTTTAA 1728 0.4323 MTVSSFFIRASNALKRYPSSSKLLLLCTLSGGGVVAYSESQSETERPIIEANKAPKKKVVVLGTGWAGTSFLKDLDASLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKGKGEIKYWEAECVKIDAANKKVFCQSNIDNLVGSGEFFLDYDFLVLAVGAQVNTFNTPGVEENCHFLKDVEDAKKIRLSITDCFEKAVLPSLSEEERRSNLHFVVVGGGPTGVEFAAELHDYVTEDLMKLYPDVKDMVKITLIQSGDHILNMFDQRISAFAEQKFTRDGIDVLTGCRVVNVSDKEITMKVKSTGEVCSVPHGLIVWSTGVALFSRKDFMEEIGQGKRRVLATDEWLRVQGVEDVYAIGDCCTINQRKVMDDISAIFTAADKDDSGNLTFEEFQDVMGDIMLRYPQVELYLKSRHLLDLSTLWDLLGNERKEIDIEALKLALSRADSQMKSLPATAQVAAQQGAYLARCLNRMDHCEEHPEGPLRFRGTGRHKFLPFQYKHFGQFAPLGGEQAAAELPGDWVSIGHSTQWLWYSVYASKQVSWRTRVLVVSDWTRRFIFGRDSSRV* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2529 575 PANTHER EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B2, MITOCHONDRIAL-RELATED 6 575 - -
Aev04g2529 575 SUPERFAMILY FAD/NAD(P)-binding domain 56 274 IPR036188 -
Aev04g2529 575 ProSitePatterns EF-hand calcium-binding domain. 390 402 IPR018247 -
Aev04g2529 575 SUPERFAMILY EF-hand 370 459 IPR011992 -
Aev04g2529 575 Pfam Pyridine nucleotide-disulphide oxidoreductase 57 378 IPR023753 GO:0016491
Aev04g2529 575 Coils Coil 437 457 - -
Aev04g2529 575 SUPERFAMILY FAD/NAD(P)-binding domain 222 376 IPR036188 -
Aev04g2529 575 PANTHER NADH DEHYDROGENASE 6 575 IPR045024 GO:0003954|GO:0006116
Aev04g2529 575 Gene3D - 450 575 - -
Aev04g2529 575 Gene3D - 47 391 - -
Aev04g2529 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 222 240 - -
Aev04g2529 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 59 78 - -
Aev04g2529 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 349 371 - -
Aev04g2529 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 161 179 - -
Aev04g2529 575 ProSiteProfiles EF-hand calcium-binding domain profile. 377 412 IPR002048 GO:0005509
Aev04g2529 575 SMART efh_1 381 409 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2529 Aev-Chr4 25108626 25116181 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2529 5 575 Chloroplast and Mitochondria Gene Families AT4G21490 64.716 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2529 K03885 - gmx:100793566 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2529 04 25108626 25116181 Aev04g2529 04 25108626 25116181 ECH