Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2528 ATGAGATTATGGGTTGGTGGCTGTACTGGAGGTATAGTGGCATATGCAGATGCAAAACCAGTAGTACAAAGTGAAAATGGTAATAATGAGTGCCGAAAAAAGAAAGTGGTGGTGCTTGGAACTGGTTGGGCTTCAACCAGTTTTCTGAAAAGTATGAAAAGCTCCTCTTATGACATCCATGTGGTTTCACCACGAAACTATTTTGCTTTCACCCCTTTGTTACCAAGTGTCACATGTGGCACTGTGGAAGCAAGGAGCGTTGTGGAACCAATTCGCAGTATCACAAAAAAGAGTGGTGTAAATATTCAATTCAGTGAAGCTGAGTGCTATAAGATCGATCCCAAGAGCCAAAAAGTTTACTGTCGTACTAATCCAAACAACAAGACGGGTGGTGTAGAAGAATTTTCTATTGATTATGATTACCTCGTAATAGGTATGGGAGCACGTTCTAATACTTTCAATACACCTGGTGTTCAAGAACATGCCCACTTTTTGAAGGAAGTGGATGATGCACTAAGAATCCGCCAAACTGTGGTGGACCTTTTTGAAAGAGCAAGCCTCCCATCTTTACCAGTGGAAGAGAAGAAGAGACTTCTGAGTTTTGTAATTGTTGGTGGTGGTCCAACTGGGGTAGAGTTTGCTGCAGAGCTTTATGATTTTGTTCATGAGGATATATCTGAGTTATACCCTTCTCTTCGAGAACATGTCAAGATCACTCTCCTGGAGGCAGGCGATCATATCTTAAACATGTTTGACAAGAGAATTACAGAATTTGCTGAGCAGAAGTTCCAAAGGGATGGCATTGATGTGAAATTGGGATCTATGGTTGTCAAAGTAAGCGAAAAAGAAATCGCAGCCAAAGACAGAGCGACAAATCAAACTCTTTCTATACCTCATGGAATGGTAGTTTGGTCAACCGGTATCGGCCCTCGCTCTGAAATACTTGAATTTATGAAGCAGATTGGACAGACTAACCGTCGCGCAATAGCCACCGATGAATGGCTAAGGGTGGAAGGATGTAACAACATCTATGCTTTAGGTGATTGTGCCACTATTAATCAACGGAAAGTAATGGAAGATATATCTGCGATATTTAGCAAAGCAGACAAAAACAATTCTGGAAAGTTAGATCTTAAAGAGTTTCAAGGTGTGGTTGGTGACATTATTGAGAGGTACCCTCAAGTAGAGATTTATTTAAAGAAGAATCAAATGAAAGACATGGCCACAATGCTAAAGGCATCTCAAGAAACCTTAGCTACAGTGGACATTGAATCCTTTAAATCTGCTCTTTCCAAGGTAGATTCTCAGATGAAAAATCTTCCTGCAACAGCTCAGGTGGCGGCTCAACAAGGCGCCTATCTTGCGGACTGCTTCAATCGCATGGAATTGTGCGAGCAGTATCCTGAAGGACCTCTCAGATTCAGGGGAACAGGACGCCATCGGTTTCATCCCTTCAGGTACAAGCATTTGGGACAATTTGCTCCTTTAGGAGGAGAACAAACTGCAGCTCAGCTTCCTGGAGATTGGATTTCAATCGGCCATAGCACCCAGTGGCTATGGTATTCCGTGTATACAAGCAAACTAGTGAGCTGGAGAACAAGGGCGCTGGTGGTAACCGTTCCCTCTCCGGAGAAGGGGTTACTGGGCCACGTGATTTGTTGCACGCAGCAAGGTCGTGGAGATCGTGAGGTCGTGGCGGTATGGCGTGCTCGAAGCTCCCTTATCCGGGATTGGGCCGCCTTGGGCCTTAATGTTGGGTTGGGCCACCAACTCCTAATCGGCCCCGTAACAGTTGCCCCCCAGCTCGGAGACCATGATTTGGGCTTGGGCTTCGAGAGCTGA 1842 0.4479 MRLWVGGCTGGIVAYADAKPVVQSENGNNECRKKKVVVLGTGWASTSFLKSMKSSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSVVEPIRSITKKSGVNIQFSEAECYKIDPKSQKVYCRTNPNNKTGGVEEFSIDYDYLVIGMGARSNTFNTPGVQEHAHFLKEVDDALRIRQTVVDLFERASLPSLPVEEKKRLLSFVIVGGGPTGVEFAAELYDFVHEDISELYPSLREHVKITLLEAGDHILNMFDKRITEFAEQKFQRDGIDVKLGSMVVKVSEKEIAAKDRATNQTLSIPHGMVVWSTGIGPRSEILEFMKQIGQTNRRAIATDEWLRVEGCNNIYALGDCATINQRKVMEDISAIFSKADKNNSGKLDLKEFQGVVGDIIERYPQVEIYLKKNQMKDMATMLKASQETLATVDIESFKSALSKVDSQMKNLPATAQVAAQQGAYLADCFNRMELCEQYPEGPLRFRGTGRHRFHPFRYKHLGQFAPLGGEQTAAQLPGDWISIGHSTQWLWYSVYTSKLVSWRTRALVVTVPSPEKGLLGHVICCTQQGRGDREVVAVWRARSSLIRDWAALGLNVGLGHQLLIGPVTVAPQLGDHDLGLGFES* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2528 613 SUPERFAMILY EF-hand 312 429 IPR011992 -
Aev04g2528 613 SMART efh_1 360 388 IPR002048 GO:0005509
Aev04g2528 613 ProSiteProfiles EF-hand calcium-binding domain profile. 356 391 IPR002048 GO:0005509
Aev04g2528 613 PANTHER NADH DEHYDROGENASE 52 539 IPR045024 GO:0003954|GO:0006116
Aev04g2528 613 SUPERFAMILY FAD/NAD(P)-binding domain 201 353 IPR036188 -
Aev04g2528 613 ProSitePatterns EF-hand calcium-binding domain. 369 381 IPR018247 -
Aev04g2528 613 SUPERFAMILY FAD/NAD(P)-binding domain 33 252 IPR036188 -
Aev04g2528 613 PANTHER NAD(P)H DEHYDROGENASE B2 52 539 - -
Aev04g2528 613 Pfam Pyridine nucleotide-disulphide oxidoreductase 34 359 IPR023753 GO:0016491
Aev04g2528 613 Gene3D - 24 382 - -
Aev04g2528 613 Gene3D - 399 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2528 Aev-Chr4 25086259 25100082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2528 10 539 Chloroplast and Mitochondria Gene Families AT4G21490 68.224 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2528 K03885 - gmx:100790773 882.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2528 04 25086259 25100082 Aev04g2528 04 25086259 25100082 ECH