Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2466 ATGATGATGAGGGCGGCAGCGGCGGCGGCGCCCCGCGGTTTGCGGCGGCTGTTCTGTACTAATTCCACGCCTTCTTCTTCGACTTTTCCATTCATTCCAGCGCCGCCGCCGGGTTCGGCCCCTGCCCGACAGGTGGCGGACCCCAACACCAACCTCTTCGTCTCTGGGCTCAGCAAACGTACAACTTCAGAAAGGCTTAGAGAAGAATTTTCAAAGTTTGGTGAAGTTGTTCATGCACGGGTGGTAACTGATCGAGTATCAGGTTACTCTAAGGGGTTTGGTTTTGTGAATTATGCTACCATCGAAGATGCTGCAAAGGGCATTGAAGGCATGGATGGCAAGTTTCTGGATGGTTGGGTTATATTTGCAGAGTATGCAAGACCAAGACCACCACCGGGCCTACCGGTAAATAATATGCCTCCTCCGCATTACCGGCAGTGA 441 0.5283 MMMRAAAAAAPRGLRRLFCTNSTPSSSTFPFIPAPPPGSAPARQVADPNTNLFVSGLSKRTTSERLREEFSKFGEVVHARVVTDRVSGYSKGFGFVNYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGLPVNNMPPPHYRQ* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2466 146 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 52 118 IPR000504 GO:0003723
Aev04g2466 146 Gene3D - 20 133 IPR012677 -
Aev04g2466 146 PANTHER TRANSFORMER-2-RELATED 2 144 - -
Aev04g2466 146 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 50 128 IPR000504 GO:0003723
Aev04g2466 146 SMART rrm1_1 51 124 IPR000504 GO:0003723
Aev04g2466 146 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL-LIKE 2 144 - -
Aev04g2466 146 SUPERFAMILY RNA-binding domain, RBD 27 137 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2466 Aev-Chr4 24252396 24254903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2466 43 130 Eukaryotic Initiation Factors Gene Family AT3G11400 38.636 1.27e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2466 - - ccaj:109789173 191.815