Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2460 ATGGAGGAGGAGCTCACATCTACCAGGAAGGAGCTAGGGAGTGCTCAAGAGGAGCTGAAGGTTGCTAAGAAGGACTTGGCGAGTGCTAGGGAGAAGCTTACTGAAGAGAAGAAAAAGTCGAAGGGGCTAGCGGGCGAGCTTGACGACCTTCGCCTTTCCTCCACTGAAACCATTTCCAAACTGGAGAGTGAGGCGGTGGAGATGCAGGTTACTTTGGCAGACTCGGCTCAGACCGTAACTGCCTTTATTAAGAGCCAAGTTGAAATACTTGCCCCCGACCTTGACCTCAGTCAAGTCGGGATGTTCACTCAGATAATAGTTGGGAAGTTGGTCAAAGTCAATCCGAACTCTCTCGACGAAGCTCATCCCTCTCCTCTAGCCGACATCGACACAGTAGCTGAGACCACCCAACAACAACGATACTGTCACTCTGGTTTGTGCTTTTGCAAGCCCATGGCAGGTCCCATCCTTCTTCGTTCCCTCTGGTCTTCCACTAGAAAATCAAATCCCTCTTCCCCTTCCCTCCTCTCGTCTTCTCGATCCCTCTTACCCCGATTCAACCAACTCTCACGCGCCTTCTCCGCCGCCGCTCCCGCCGCCGCTAGTGGAGATCCCGGCGGCGCCCTCGACCCTAGCCGCCTCCGCAATGTGGCTGTTATCGCACATGTCGACCACGGCAAGACAACGCTCATGGATCGCCTGCTCCGGCAGTGTGGCGCCGACATCCCCCACGAGCGCGCCATGGACTCCATCTCGCTGGAGCGAGAGCGCGGCATCACCATCGCTTCCAAGGTTACATCCATTTCGTGGAAGGAGAATGAGCTGAACATGGTCGATACTCCTGGACATGCAGATTTTGGTGGTGAAGTTGAACGTGTTGTTGGTATGGTTGAAGGAGCTGTTTTAGTTGTTGATGCTGGTGAAGGTCCACTTGCGCAAACAAAATTTGTTCTTGCAAAAGCCTTAAAGTATGGGTTGCGGCCTATTCTTCTTCTAAATAAAGTAGACCGACCTTCTGTTACTGTGGAGACATGTGATGAAGTTGAGAGTCTTGTGTTTGATCTATTTGCCAACCTGGGTGCTACAGAGGAGCAACTAGACTTTCCGGTTCTCTATGCTTCTGCTAAAGAGGGATGGGCATCTAGGACGTTTACCAAGGATCCTCCAGCTGAGGATAAGAATATGTCACAATTGCTTGATACCATTGTTTCGCATGTCCCACCACCAAATGCAAGCATTGATGCGCCTTTCCAAATGCTGGTTTCAATGATGGAACGGGACTTCTATCTTGGTCGAATTTTGACTGGTCGCATATATTCTGGGGCTGTTCGTGTTGGTGATAGGGTTCATGGGCTGCGTAATAAGGATTCTGTTGCAGAAAAGATTGAAGATGGGAAGGTGGTGAAACTAATGAAAAAGAAAGGCACAAACATGGTTCTAACAGAATGTGCTGGAGCTGGTGATATAATTTCTATGGCTGGCTTGGCAAGTCCTTCAATAGGCCACACAGTGGCAACCGTGGAGGTTATGTCCGTATTACCCACAGTTGAATTGGATCCTCCAACAATTTCCATGACTTTTGGTGTAAATGACTCCCCATTAGCTGGTCGTGATGGTACTCATTTGACTGGAGGAAGAATTGGTGACCGACTGATGGCTGAAGCTGAAACAAACCTTGCCATAAATGTGCTTCCAGGCTTGTCAGAATCATATGAAGTTCAGGGAAGAGGAGAGCTACAGCTGGGTATCCTAATTGAAAACATGAGACGTGAGGGATTCGAGTTATCTGTCTCTCCACCAAAAGTCATGTATAAGACTGAAAATGGTCAGAAACTTGAGCCAGTAGAAGAAGTTACAATTGAGGTTAATGATGAGCATGTTGGGTTGGTAATGGAGGCCTTGTCTCATAGACGAGCCGAGGTCACTGACATGGGTCCTGTCTCAGGAGCTGTTGGTCGGACTAGATTGTCTTTGACTTGTCCATCAAGGGGCCTGGTAGGTTACAGGAGTGTGTTCAGTAGTGACACACGTGGAACTGGATTTATGCATCGTGCTTTCCATGCATATGAAAAGTTTCGAGGTCCTCTTGGCAATGTTAGAAAAGGAGTTTTGGTTTCAATGGGTTATGGTACAATCACAGCTCATGCATTGATGAGCTTAGAAGCACGTGGGATTCTTTTTGTAACTCCTGGAATGGAGACATATGATGGAATGATTGTTGGAGAACATTCACGGGATACAGATCTCGATGTCAATCCAGTGAGAGCTAAAGAACTAACAAATGTGCGTGCTGCAGCCAAGGATGAGAATGTGAAGCTGACTCCCCCCCGTCTTATGACGCTTGAAGAAGCTATAGGATATGTGGCTTCAGATGAACTTATTGAGGTTACACCAAAGGCCATCCGGTTACGGAAGAAATATCTTGATGTTAACAAGCGTAAAGCCATGAGTAAAAAGCCAAAGGAATGA 2469 0.48 MEEELTSTRKELGSAQEELKVAKKDLASAREKLTEEKKKSKGLAGELDDLRLSSTETISKLESEAVEMQVTLADSAQTVTAFIKSQVEILAPDLDLSQVGMFTQIIVGKLVKVNPNSLDEAHPSPLADIDTVAETTQQQRYCHSGLCFCKPMAGPILLRSLWSSTRKSNPSSPSLLSSSRSLLPRFNQLSRAFSAAAPAAASGDPGGALDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSISWKENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVDRPSVTVETCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASRTFTKDPPAEDKNMSQLLDTIVSHVPPPNASIDAPFQMLVSMMERDFYLGRILTGRIYSGAVRVGDRVHGLRNKDSVAEKIEDGKVVKLMKKKGTNMVLTECAGAGDIISMAGLASPSIGHTVATVEVMSVLPTVELDPPTISMTFGVNDSPLAGRDGTHLTGGRIGDRLMAEAETNLAINVLPGLSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGQKLEPVEEVTIEVNDEHVGLVMEALSHRRAEVTDMGPVSGAVGRTRLSLTCPSRGLVGYRSVFSSDTRGTGFMHRAFHAYEKFRGPLGNVRKGVLVSMGYGTITAHALMSLEARGILFVTPGMETYDGMIVGEHSRDTDLDVNPVRAKELTNVRAAAKDENVKLTPPRLMTLEEAIGYVASDELIEVTPKAIRLRKKYLDVNKRKAMSKKPKE* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2460 822 CDD BipA_TypA_II 417 514 - -
Aev04g2460 822 Gene3D - 604 698 - -
Aev04g2460 822 SUPERFAMILY EF-G C-terminal domain-like 613 729 IPR035647 -
Aev04g2460 822 CDD BipA_III 521 598 - -
Aev04g2460 822 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 156 821 - -
Aev04g2460 822 CDD TypA_BipA 214 409 - -
Aev04g2460 822 Gene3D bipa protein 699 814 IPR042116 -
Aev04g2460 822 SUPERFAMILY Translation proteins 359 514 IPR009000 -
Aev04g2460 822 TIGRFAM TypA_BipA: GTP-binding protein TypA/BipA 214 814 IPR006298 GO:0005525
Aev04g2460 822 Pfam Elongation factor G C-terminus 611 694 IPR000640 -
Aev04g2460 822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 419 IPR027417 -
Aev04g2460 822 PRINTS GTP-binding elongation factor signature 276 286 IPR000795 GO:0003924|GO:0005525
Aev04g2460 822 PRINTS GTP-binding elongation factor signature 256 264 IPR000795 GO:0003924|GO:0005525
Aev04g2460 822 PRINTS GTP-binding elongation factor signature 216 229 IPR000795 GO:0003924|GO:0005525
Aev04g2460 822 PRINTS GTP-binding elongation factor signature 292 303 IPR000795 GO:0003924|GO:0005525
Aev04g2460 822 PRINTS GTP-binding elongation factor signature 328 337 IPR000795 GO:0003924|GO:0005525
Aev04g2460 822 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 212 410 IPR000795 GO:0003924|GO:0005525
Aev04g2460 822 Coils Coil 5 39 - -
Aev04g2460 822 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 249 264 IPR031157 -
Aev04g2460 822 Gene3D Translation factors 412 515 - -
Aev04g2460 822 TIGRFAM small_GTP: small GTP-binding protein domain 215 346 IPR005225 GO:0005525
Aev04g2460 822 SUPERFAMILY EF-G C-terminal domain-like 519 602 IPR035647 -
Aev04g2460 822 Gene3D - 212 410 IPR027417 -
Aev04g2460 822 Pfam Elongation factor Tu GTP binding domain 213 407 IPR000795 GO:0003924|GO:0005525
Aev04g2460 822 CDD BipA_TypA_C 613 693 IPR035651 -
Aev04g2460 822 Gene3D Elongation Factor G (Translational Gtpase), domain 3 522 806 - -
Aev04g2460 822 PANTHER ELONGATION FACTOR FAMILY PROTEIN 156 821 - -
Aev04g2460 822 Pfam Elongation factor Tu domain 2 431 504 IPR004161 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2460 Aev-Chr4 24195774 24211683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2460 213 337 Eukaryotic Initiation Factors Gene Family AT3G22980 42.748 2.83e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2460 K06207 - gmx:100782425 1165.6