Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2334 ATGGATCTTCTGTGCGACGCATATTCTAATACCTCAGACGATGAAGAACAACCGGAACAAATAGCGCAACAACAACCACCACCACCACCCAAACGTCAGAGGCTCTCACTCTTCTCTTTGAACCCGCCAAAACCCTATCTTCATCCAACTCCTTCTCCTTCTCCTGCTTCTCTTTCCAACCTCCCAACACAAGCTCCCATTCCTGGAAGTTATGTTTCCAAGCGACAACGTGCTCTGCTGGCTCCCCTCCCTTCTGTTCCTGAACCTGTCCGTTCTCCCTCCGTGGTTCAATCTTCATCTACTCTCTCAGGAAGTATCTCGGATGCTGATATACCGCCTAACATTTTATCATTGTTGAAAAATAAAGCAAAGTGTCATCAAAACATGAAATCAGTGCCTGGAAAGCTATCTGCAGCTCTTTATGGGCATACAAAAGCTGTTAATGCTATACATTGGTCATCAACTTATCCTCATGTTCTTGCATCTGCTGGAATGGATCATATGGTTTGCATATGGAATGTATGGAGCAGAGATCAGAAGAAAGCACGTGTGCTAAACTTCCATAACGCAGCAGTGAAAGATGTAAAACTGTCTCAACAAGGTCTCTTTCTACTTTCTTGTGGATATGATTGCACGTCCAGATTGGTTGATATTGAAAAGGGATTAGAGACTCAGGTTTTCAGAGAAGATCAAGTTGTTGGAGCTATAAAGTTCCATCCAGACAATCCTAATCTTTTCCTATCTGGGGGATCCAAGGGCCATATCAAACTATGGGATATCAGAACAGGAAAAATAGTGCATAACTACAATCGAAATTTGGGTCCAATTCTGGATGTAGAGTTTACAATGAATGGGAAGCAATTCATTTCTTCTAGTGATGTATCTGGGAGCAATGTCAGCCAGAATTCTATCATTGTTTGGGATTTGTCAAGACAGGTTCCATTGTCTAATCAGGTTTATGTGGAAGCTTATACCTGTCCTTGTGTAAGATGCCATCCATTTGATTCGACTTTTGTTGCCCAGTCAAATGGTAATTATGTTGCCATTTTTAGTACCACCCCACCTTACAGACTCAACAAGTATAAGCGGTATGAGAGCCATGGTGTCTCAGGGTTCCCAATTAAGTGTAGTTTCAGCTTGGATGGGAAGAAGCTTGCCTCTGGCTCCTCAGATGGTTCCATTTACCTTTATGATTATCAATCATCCAAAGTTGTTAATAAAATTAAGGCCCACGATCAAGCATGCATAGATGTTGCCTTCCACCCTGTTATACCTAATTTTATTGCTTCATGCTCATGGGATGGAAGCATTTCAGTATTTGAGTAG 1326 0.4201 MDLLCDAYSNTSDDEEQPEQIAQQQPPPPPKRQRLSLFSLNPPKPYLHPTPSPSPASLSNLPTQAPIPGSYVSKRQRALLAPLPSVPEPVRSPSVVQSSSTLSGSISDADIPPNILSLLKNKAKCHQNMKSVPGKLSAALYGHTKAVNAIHWSSTYPHVLASAGMDHMVCIWNVWSRDQKKARVLNFHNAAVKDVKLSQQGLFLLSCGYDCTSRLVDIEKGLETQVFREDQVVGAIKFHPDNPNLFLSGGSKGHIKLWDIRTGKIVHNYNRNLGPILDVEFTMNGKQFISSSDVSGSNVSQNSIIVWDLSRQVPLSNQVYVEAYTCPCVRCHPFDSTFVAQSNGNYVAIFSTTPPYRLNKYKRYESHGVSGFPIKCSFSLDGKKLASGSSDGSIYLYDYQSSKVVNKIKAHDQACIDVAFHPVIPNFIASCSWDGSISVFE* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2334 441 CDD WD40 136 441 - -
Aev04g2334 441 MobiDBLite consensus disorder prediction 1 69 - -
Aev04g2334 441 SUPERFAMILY WD40 repeat-like 133 440 IPR036322 GO:0005515
Aev04g2334 441 ProSiteProfiles Trp-Asp (WD) repeats profile. 377 407 IPR001680 GO:0005515
Aev04g2334 441 MobiDBLite consensus disorder prediction 83 104 - -
Aev04g2334 441 Pfam WD domain, G-beta repeat 233 259 IPR001680 GO:0005515
Aev04g2334 441 Pfam WD domain, G-beta repeat 364 398 IPR001680 GO:0005515
Aev04g2334 441 Pfam WD domain, G-beta repeat 137 173 IPR001680 GO:0005515
Aev04g2334 441 Gene3D - 117 441 IPR015943 GO:0005515
Aev04g2334 441 ProSiteProfiles Trp-Asp (WD) repeats profile. 226 268 IPR001680 GO:0005515
Aev04g2334 441 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 408 441 - -
Aev04g2334 441 ProSiteProfiles Trp-Asp (WD) repeats profile. 140 182 IPR001680 GO:0005515
Aev04g2334 441 ProSitePatterns Trp-Asp (WD) repeats signature. 160 174 IPR019775 -
Aev04g2334 441 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 140 174 - -
Aev04g2334 441 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 1 441 - -
Aev04g2334 441 SMART WD40_4 178 217 IPR001680 GO:0005515
Aev04g2334 441 SMART WD40_4 401 441 IPR001680 GO:0005515
Aev04g2334 441 SMART WD40_4 133 173 IPR001680 GO:0005515
Aev04g2334 441 SMART WD40_4 359 398 IPR001680 GO:0005515
Aev04g2334 441 SMART WD40_4 262 308 IPR001680 GO:0005515
Aev04g2334 441 SMART WD40_4 220 259 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2334 Aev-Chr4 22453274 22466732 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2334 134 397 U-box Gene Family AT1G04510 23.616 1.18e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2334 K24742 - gmx:100790592 651.744