Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2317 ATGAGAAGTAGTAGCAACATGAACAATTTAACGCCTTTGCCGGGGGCTCGGAGAGGTGCAGATAGAGCCTATGATGTTCACACTTCAAACAATAGTGATCGCCATGCGGTGCCTGTGTTTCACATATCTCACTCTACCCGGGCTACTGATAACAGGAATTCAGGTGTTCTTGATCCAAGGAGGTTGAGGGAAGTTAGAGCTCCAACAGGACTCCACAGTATACAAAATTGTCCTGCACAACCACATAGCAGACAAGTTTATATTCATCGAGGGGAGAATAGAAGGGGTTATAACCCCAGGCTGAGGGAGATTTTCCGGCAATCACCACCAAGAACTGCATTCCAAACAAGTGCAGAAGTCCGCCAACCGGTAGAAATTCCCAGATCAGAAGCATTGAGTAAGCTTAAGAAAGAAGTCTATAACCCCACACCAAAGAGGGAAGCCAACAGAGTGAGCTCATATATCAGAGATAATAATGCTGTAAACGGATCTGAATTGAGGGAGAAAGATAATGATGAAGGTAAGAGGTGTTCTATTTGTTTGGAAGATTTTGAGCCAAAAGAAGAGGTGATGGTAACTCCATGCAACCACATGTTTCATGAGGAATGCATTGTACCATGGTTAACGAGCAATGATCAGTGCCCAGTTTGTAGGTCTGTGATCGGTGAAAGAGAGAGGGAGAGCCCTAATTCATTCTACAACAGAAATAATAACTTTGCCACTTTGCAACCCAGTGACGTGATTGCTGGAGAACTTTTCTCAATTTTGAGGGCCATGGAAGAAGCATTTCATTTGGGCAATGGGATTCACTAG 813 0.4403 MRSSSNMNNLTPLPGARRGADRAYDVHTSNNSDRHAVPVFHISHSTRATDNRNSGVLDPRRLREVRAPTGLHSIQNCPAQPHSRQVYIHRGENRRGYNPRLREIFRQSPPRTAFQTSAEVRQPVEIPRSEALSKLKKEVYNPTPKREANRVSSYIRDNNAVNGSELREKDNDEGKRCSICLEDFEPKEEVMVTPCNHMFHEECIVPWLTSNDQCPVCRSVIGERERESPNSFYNRNNNFATLQPSDVIAGELFSILRAMEEAFHLGNGIH* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2317 270 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 5 266 - -
Aev04g2317 270 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 161 234 IPR013083 -
Aev04g2317 270 SUPERFAMILY RING/U-box 166 225 - -
Aev04g2317 270 ProSiteProfiles Zinc finger RING-type profile. 177 218 IPR001841 -
Aev04g2317 270 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 5 266 - -
Aev04g2317 270 MobiDBLite consensus disorder prediction 1 22 - -
Aev04g2317 270 Pfam Ring finger domain 176 218 IPR001841 -
Aev04g2317 270 CDD RING-H2_PA-TM-RING 177 218 - -
Aev04g2317 270 SMART ring_2 177 217 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2317 Aev-Chr4 22253648 22256934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2317 130 267 C3H Transcription Factor Family AT3G58720 50.694 7.47e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2317 - K11982 aip:107630161 296.975