Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2314 ATGGCTTCGGAGAAGAAACTGTCGCATCCAATGAGGGAGATAAAGGTTCAGAAGCTCGTTCTCAACATCTCCGTCGGTGAGAGCGGAGATCGCCTCACAAGAGCTGCCAAGGTGCTGGAGCAACTAAGTGGCCAAACCCCAGTATTCTCCAAAGCAAAGTACACTGTTCGTTCCTTTGGGATTAGAAGAAATGAGAAGATTGCATGCTATGTCACCGTTAGAGGTGACAAAGCGATGCAGCTTTTGGAGAGTGGTTTAAAGGTGAAGGAATATGAACTTCTAAGAAGGAATTTCAGTGATACTGGATGCTTTGGCTTTGGTATTCAGGAGCATATTGATTTGGGAATCAAGTATGATCCTTCTACTGGTATTTATGGAATGGATTTCTTTGTTGTTCTGGAACGTGCTGGTTATCGCGTTGGACGTCGTCGTAGGTGCAAGTCGCGTGTTGGTATTCAGCACCGTGTCACAAAGGACGATGCTATGAAGTGGTTCCAGGTGAAATATGAGGGAGTGATCCTTAACAAGGCCCAGACTATTGTTTAG 546 0.4542 MASEKKLSHPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKAKYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERAGYRVGRRRRCKSRVGIQHRVTKDDAMKWFQVKYEGVILNKAQTIV* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2314 181 Pfam ribosomal L5P family C-terminus 66 164 IPR031309 -
Aev04g2314 181 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 1 172 IPR002132 GO:0003735|GO:0005840|GO:0006412
Aev04g2314 181 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 1 180 IPR002132 GO:0003735|GO:0005840|GO:0006412
Aev04g2314 181 PANTHER 60S RIBOSOMAL PROTEIN L11-1 1 180 - -
Aev04g2314 181 Gene3D - 2 177 IPR022803 -
Aev04g2314 181 ProSitePatterns Ribosomal protein L5 signature. 39 55 IPR020929 GO:0003735|GO:0005840|GO:0006412
Aev04g2314 181 SUPERFAMILY RL5-like 9 173 IPR022803 -
Aev04g2314 181 Pfam Ribosomal protein L5 10 62 IPR031310 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2314 Aev-Chr4 22231118 22236410 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2314 1 181 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 93.370 2.19e-127 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2314 K02868 - mus:103987828 337.035