Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2290 ATGGAACAGTTGAAATTGGCTTCAGAATCTGACACTAGAGAGGATTCTCCTCTTAATTCGAAGTCAAAAAACAACAATGCACTTGAGTCTTCTGGAAGTCCAAGAAGTAGAAAGGTTTCAGCTAGATGGGATCCAGTTGAGGCATGTCGACCTGTAATTGATGAAGCACCTGTGTTTTATCCGACTATCGAGGAATTTGAAGACACACTCGGCTATATAGCAAATATACGCCCCCAAGCTGAACCACATGGAATATGTAGGATTGTTCCCCCTGCTTGCTGGGTTCCACCTTGCCCCCTCAAGGAGAAAGATCTGTGGGAAAATGCTAAATTTCCCACACGAATTCAGCAAATTGATTTGCTACAAAATAGGGGGCCCATGAGAAAAAAAAGTAGGGGAAGGAAAAGAAAACGTAGAAAGCAACCCAAAATGGGCACATGTAGGAGAATTGTCAATTCAAATTCAGGAGCTAATAATGCTTCTGAGCCTGATGAGAAATTTGGTTTCCAATCAGGCTCAGACTTCACATTTAAGGACTTTCAGCAATATGCTAATTATTTTAAGGAATGCTACTTTCGTTTGAAAGATGCTAATGGAGATGAAGTTAGTGATAACAACCACCAAAAGAGATGGGAGCCTTCTGTAGAGGATATTGAAGGTGAATATTGGCGCATTGTCGAGCGACCAACTGATGAGGTCGAGGTGTACTATGGAGCTGACTTGGAAACTGGTTCACTTGGGAGTGGTTTTCCTAAAGCGACATCCTTAACTAAGAGCAGCTCAGATCAGTATGCTCTATCTGGCTGGAATCTAAATAATTTCCCGCGGCTACCAGGTTCTGTACTAAATTTTGAAGGAAGTGACATCTCAGGAGTTCTTGTGCCATGGCTGTATGTTGGCATGTGCTTTTCATCATTTTGCTGGCATGTTGAGGATCATCACCTCTATTCTCTTAATTATCTACACTGGGGTGATCCAAAAGTATGGTATGGAGTACCTGGAAATCATGCTTCTGCTTTGGAAGATGCAATGAGGAAGCACATGCCTGATTTATTTGAGGAACAACCAAATCTACTCAATGAACTGGTTACTCAGTTATCTCCTTCAATTCTTAAATCTGAGGGTGTACCTGTATATCGTACTGTTCAGAATTCTGGGGAGTTTGTTATTACTTTTCCAAGGGCATACCACTCTGGCTTCAATTGTGGCTTCAACTGTGCAGAGGCAGTGAATGTGGCTCCTGTTGATTGGCTAATGCATGGCCAAAATGCTGTTGAGCTTTACAGTTTGCAATGCCGTAAGACATCATTGTCACATGACAAGCTGTTATTTGGCTCAGCACAGGAAGCTGTACAAGCCCTTGCTAAACTAGTTTTTCTTGGAAAAGAAACTCCAAAAATTTTGAAATGGAAAAGTGTTTGTGGGAAAGATGGAGTTCTTACAAATGTCATTAAGACAAGAATAAAGATGGAAGAAGAGAGGCTAGAATGTCTTCCAACTCATCCCAAATTGCTAAAGATGGACAGAGACTTCGATTTGTATGAGGAAAGAGAATGCTTCTCTTGCTTCTATGACTTGCACCTATCTGCTGTGGGTTGCAAGTGCTCTCCTAACAAGTATTCTTGTCTAAAGCACTCAAAGTTACTATGCTCCTGTGCAATGGACAATAGGTTTGTTCTGCTTCGATATACTATTGGTGAGCTGAATAAATTGGTCAAAGCATTAGAAGGAGAGTCATCTTCTATTGAGGAGTGGCTAAATAAAAGCTTTGTAAAGGTTTCTACTGATGTGAATAAGGTTTCAATATACAAATCAGATTTGGAGAGAGATATGTATAAAACCAAGAATGATGAAGAGGAAAACTCAATTGGTTGTGCAGGAACAAAGGATAACTCAAATTTAGATAGACTTAGCAGGTCTTATGTTACGTCAGAAATAGTGCAGTCTCAGTCTCTCCTTGTATCTTCTGGTTCATCTGATGTCACCATCGATATTCATAATAATATTGAAAAAAAAGTGGTCTTAGACAATGGAGATAAGGTGAATCAGGAAGATTATTTGGATTTGAATCTTGATGTTATATCTGGTGAAAATGACAGTGATTTGCTATTTATTGCTGATAACCATCATAATAAGGGTGTCCCAATTGAGGAAAAAGCATGCTGCTCAGATTCCGGAAGGAAACAAGACAGCATGGAACTTGATGATTGTGTTTTGAGGACAGAATTTTCATCATGTTCAAGAGATGTTCGCAATTCATGTCTGTTAGATGGTAGAAAATTTGGGGAAGATCTGCAAATGGATTCTGTTTCAGGAAAGCAGCCCTATATCAACACCATGGACACAACCATATCTTCGACTGGTGAAAGCTATCTAATGCAATTGCTTGGGACTACTGTGAAACTCATCAACCTGGGATCTGTTGTCTATGGAAAGCTTTGGTGCAATAAGCAAGCAATATATCCAAGAGGATTCAAGAGTCGAGTTAGTTTCTTTAGTATTCTTGATCCAGCAAGAATGTGTAGCTATATTTCTGAAGTTGTTGATGCTGGATTTCTTGGACCTCTTTTCAAGGTTACCGTGGAAGAACATCCAAGCAAGGCTTTCACTGATAGCACTCCAGATAGGTGCTGGGAATCAGTTCTAAAGACACTGCATCGTGAAATCATTAGAAGAAGGAGTCTAGGTGAACTAGAATTTCCTCCCTTGGAGTGTCTGAAAAACATCAATGGTCTCAGAATGTTTGGCTTCCATTTACCATCCATTGTTCAGGCCATCGAAGCTCAAGATGTCACTCGTCAGTGCGTAGAGTACTGGAATCACAAAGTTATCCCTGCCTCTTCCGGCAGCGTCCTTGATAAGACAACGGATGGTTCAAGTAGCAGCTCTTTAGGCAATGTCAACGCCAAAGTTTTTGGTGTCAATTTGATTAAGCAGGAAAAGGGAGACATGGGTGGAAATTGTCATTCCCTTGAAGAGGTGAAATCAATATTACAAGGATTGATAAAGAAGGCAAGTCCTGATGAGTTAAACACAATGCACAAGTTATTCAGCTCTGAGACTTTATGCTCTCAGTGGAGAACTACATTCTTAGCACTGATGGAGGGGATCAATAAAGCTTCTAGGATGATAAAACAAGAATAA 3144 0.403 MEQLKLASESDTREDSPLNSKSKNNNALESSGSPRSRKVSARWDPVEACRPVIDEAPVFYPTIEEFEDTLGYIANIRPQAEPHGICRIVPPACWVPPCPLKEKDLWENAKFPTRIQQIDLLQNRGPMRKKSRGRKRKRRKQPKMGTCRRIVNSNSGANNASEPDEKFGFQSGSDFTFKDFQQYANYFKECYFRLKDANGDEVSDNNHQKRWEPSVEDIEGEYWRIVERPTDEVEVYYGADLETGSLGSGFPKATSLTKSSSDQYALSGWNLNNFPRLPGSVLNFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVPGNHASALEDAMRKHMPDLFEEQPNLLNELVTQLSPSILKSEGVPVYRTVQNSGEFVITFPRAYHSGFNCGFNCAEAVNVAPVDWLMHGQNAVELYSLQCRKTSLSHDKLLFGSAQEAVQALAKLVFLGKETPKILKWKSVCGKDGVLTNVIKTRIKMEEERLECLPTHPKLLKMDRDFDLYEERECFSCFYDLHLSAVGCKCSPNKYSCLKHSKLLCSCAMDNRFVLLRYTIGELNKLVKALEGESSSIEEWLNKSFVKVSTDVNKVSIYKSDLERDMYKTKNDEEENSIGCAGTKDNSNLDRLSRSYVTSEIVQSQSLLVSSGSSDVTIDIHNNIEKKVVLDNGDKVNQEDYLDLNLDVISGENDSDLLFIADNHHNKGVPIEEKACCSDSGRKQDSMELDDCVLRTEFSSCSRDVRNSCLLDGRKFGEDLQMDSVSGKQPYINTMDTTISSTGESYLMQLLGTTVKLINLGSVVYGKLWCNKQAIYPRGFKSRVSFFSILDPARMCSYISEVVDAGFLGPLFKVTVEEHPSKAFTDSTPDRCWESVLKTLHREIIRRRSLGELEFPPLECLKNINGLRMFGFHLPSIVQAIEAQDVTRQCVEYWNHKVIPASSGSVLDKTTDGSSSSSLGNVNAKVFGVNLIKQEKGDMGGNCHSLEEVKSILQGLIKKASPDELNTMHKLFSSETLCSQWRTTFLALMEGINKASRMIKQE* 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2290 1047 MobiDBLite consensus disorder prediction 19 37 - -
Aev04g2290 1047 ProSiteProfiles FYR domain FYRN motif profile. 792 850 IPR003888 GO:0005634
Aev04g2290 1047 SMART cupin_9 263 429 IPR003347 -
Aev04g2290 1047 ProSiteProfiles FYR domain FYRC motif profile. 852 942 IPR003889 GO:0005634
Aev04g2290 1047 MobiDBLite consensus disorder prediction 127 145 - -
Aev04g2290 1047 MobiDBLite consensus disorder prediction 147 165 - -
Aev04g2290 1047 Pfam JmjC domain, hydroxylase 296 412 IPR003347 -
Aev04g2290 1047 Pfam jmjN domain 57 90 IPR003349 -
Aev04g2290 1047 MobiDBLite consensus disorder prediction 1 18 - -
Aev04g2290 1047 SMART JmjN_1 55 96 IPR003349 -
Aev04g2290 1047 ProSiteProfiles JmjC domain profile. 263 429 IPR003347 -
Aev04g2290 1047 MobiDBLite consensus disorder prediction 122 165 - -
Aev04g2290 1047 Pfam C5HC2 zinc finger 519 571 IPR004198 -
Aev04g2290 1047 MobiDBLite consensus disorder prediction 1 41 - -
Aev04g2290 1047 Gene3D Cupin 41 413 - -
Aev04g2290 1047 SUPERFAMILY Clavaminate synthase-like 174 452 - -
Aev04g2290 1047 SMART fyrc_3 856 948 IPR003889 GO:0005634
Aev04g2290 1047 PANTHER LYSINE-SPECIFIC DEMETHYLASE 10 1041 - -
Aev04g2290 1047 SMART fyrn_3 806 850 IPR003888 GO:0005634
Aev04g2290 1047 Pfam F/Y-rich N-terminus 799 847 IPR003888 GO:0005634
Aev04g2290 1047 Gene3D - 796 936 - -
Aev04g2290 1047 ProSiteProfiles JmjN domain profile. 56 97 IPR003349 -
Aev04g2290 1047 Pfam F/Y rich C-terminus 854 941 IPR003889 GO:0005634
Aev04g2290 1047 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 10 1041 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2290 Aev-Chr4 21861693 21880148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2290 738 977 JUMONJI Transcription Factor Family AT1G30810 42.387 9.52e-47 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aev04g2290 JmjC 5.2e-47 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2290 - - gmx:100781830 1497.26