Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2268 ATGTTCTCCAGCTCCCAATTGGACTCCATCTCCGCCTTCAATGGCGGCGGTTTCATGGCCTCACAATCCACCAACCTCAACGATTCACCTGCTCCTGCAAAAAGGCGCGATACTCAGGGTTTGATTCCGGTGACAATGAAGCAGATAAGTGAAGCATCGCAATCTGGTGATGAAAAGTCTAATTTTGTGATCAACGGTGTCGATGTAAACAATGTAACCTTGGTTGGAATGGTATATGAGAAAGTTGAGAGGAACACTGATGTTAATTTTATTTTAGATGATGGAACAGGACGAATCAAATGCCGAAGATGGGTTAACGAGACATTTGACACAAAGGAAATGGAAGAAGTACGGGATGGTATGTACGTTCGTGTTTTTGGGCATTTGAAAAGCTTTCAAGGTGTAAGGCAACTTGTAGCCTTCTCTGTCAGGCCTGTGGCAAATTTTGATGAGATCTCGTTTCACTTTATTGATTGTATACATAACCACCTCCGAACCAAAGTAAAGGTGGAAGGAATCGCCTCTGTGAATCCTCCATTGGACTCATCTTTCAGCACTCCTGTCAGAAATGCATCAAATGGGAATCAGGCACCATCATCAAATCCAGGATATGCACAATATAGTGTGGATGGACTCAAGGATTGTGATAAATTGGTTATTCAATATCTGCAACAGCATTCAGACATGGAAGATGAACGGGGAATACACGTTAATGAACTATCTCGAGAGCTTAAGCTTCCAATGGACAAGATCATGTTGTCGCTAAAGACTCTTGGAGATGACGGTTTAGTATACTCCACCATAGATGACTTCCATTACAAACAAGCTTGA 831 0.4236 MFSSSQLDSISAFNGGGFMASQSTNLNDSPAPAKRRDTQGLIPVTMKQISEASQSGDEKSNFVINGVDVNNVTLVGMVYEKVERNTDVNFILDDGTGRIKCRRWVNETFDTKEMEEVRDGMYVRVFGHLKSFQGVRQLVAFSVRPVANFDEISFHFIDCIHNHLRTKVKVEGIASVNPPLDSSFSTPVRNASNGNQAPSSNPGYAQYSVDGLKDCDKLVIQYLQQHSDMEDERGIHVNELSRELKLPMDKIMLSLKTLGDDGLVYSTIDDFHYKQA* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2268 276 CDD RPA2_DBD_D 71 164 - -
Aev04g2268 276 PANTHER REPLICATION PROTEIN A-RELATED 1 276 IPR040260 -
Aev04g2268 276 Pfam Replication protein A C terminal 187 270 IPR014892 -
Aev04g2268 276 Pfam OB-fold nucleic acid binding domain 72 144 IPR004365 GO:0003676
Aev04g2268 276 SUPERFAMILY "Winged helix" DNA-binding domain 210 274 IPR036390 -
Aev04g2268 276 SUPERFAMILY Nucleic acid-binding proteins 41 165 IPR012340 -
Aev04g2268 276 PIRSF RPA32 1 276 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aev04g2268 276 Gene3D - 206 276 IPR036388 -
Aev04g2268 276 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 1 276 - -
Aev04g2268 276 Gene3D - 37 168 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2268 Aev-Chr4 21592343 21599284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2268 1 274 Core DNA Replication Machinery Family AT2G24490 48.029 3.00e-90 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2268 K10739 - gmx:100802512 437.187