Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2184 ATGGACAATGGTTGCTTCTCTTCCCCTCGACGCGATGTTTTCCCTGCAGGTCTCAGAGTTCTTGTTGTTGATGATGATCCAACTTGGCTCAGGATCCTTGAAAAGATGCTCAAGAAGTGCTCCTATGAAGTGACTACATGTTGTTTGGCAAGACATGCTCTAAACTTGCTTCGCGAAAGGAAAGATGGATATGATATAGTGATCAGCGACGTAAACATGCCTGACATGGATGGTTTCAAGCTTCTTGAGCATGTTGGACTTGAGATGGATCTTCCTGTCATTATGATGTCGGTTGATGGAGAAACGAGCAGGGTGATGAAAGGCGTCCAGCATGGAGCATGTGATTATCTACTTAAGCCGATAAGGATGAAGGAACTGCGAAACATATGGCAGCACGTATTTAGGAAAAGGATACACGAGGCAAGAGAATTCGAGAGTCTCGAGGGTTTTGAGAGCATTCACTTGATGAGAAACGGGTCAGAGCAATCCGATGATGGGAACCTGTTTGCTGTTGAAGATATGACCTCAACAAAGAAAAGAAAAGATGCAGATAACAAACATGATGACAGAGAATTGGTGGATTCATCTTCCACAAAGAAAGCTAGAGTAGTTTGGTCTGTGGATCTTCATCAGAAGTTTGTTAAAGCAGTGAATCAAATTGGATTCGACAAAGTTGGTCCCAAGAAAATACTAGATTTGATGAATGTTCCTTGGCTGACTAGGGAAAATGTTGCAAGCCATTTGCAGAAATATCGGCTTTACTTGAGTAGGCTTCAGAAAGAAAACGATCAGAAATCACCCTCGAGTGGAATGAAGCATTCAGATTTACCTTTGAAAGATCTGGCAAGTTTCGGAGTTGAGAACTCCGAGAACAAGCAACACAATGATGTTTCAACTGATAGCTACAGTTATTCAGAAGGAACACTACAACTTCATCACATGGAAGCTAAAGTTCATGAAGTTGATCCCAAGGGAATTGTTTCACAGCCCACAACCACCACAGAAAAGGGAAGATCTTTTACGGTTAACAACAGTACCGATACAAAGATAGGAAAGAGTTTACATATGGGCCTTAATCAACCTTTTGACCCTCTAGAGTCAGAAGGGAACCATGCATCAGTGCTTGATTGCACCATGCCAACACGGTACTCTTGGGCTGAAGTTCCAGAAATGCAACTCAAAGAACACAAATCGCTTGTTCAGTTAGATGATAGCTTCGGCCGGTTTCCGTTACATGGTAAGCAACACCACATCCAAGTTGATCATCAGTCGCAGTCAATTGGTTCAATTAATTCCAATCCATCGTTGACAGAGGAAGATGTTGCTGCATGCATAGAAACAAAGCCTTTGTATGCGGATTACAAGCGCGAATACAACAGTTCCGTGAGTTCAATAGGGAGTGCTGCGGTTGACACTTTTCCTATTGAACCTGGAAGCCTTGTGATGAATGATCAATCTTCAGAACCCATTTCCACTCCAAACTTGGGTTTGAAAACACAAACATCTAATCTCAGTTGCATCTCTGATATGGAATTCTACCAAAGAAGCCTACTTTTGGGGGGCGATACTGGGGCGCCGGCGCCGGCTTCTTTACCACCTTTGGACGACGACTTGCATTTCTGTTGGGTACAAGGTGAATGCTCTAACATGAACTTCAATCTGCAGAACATGTCAGGGTGTTATGATCCAGGGCTAATTGCAGAAATTCCAACCCATTACTATGATTCAGCAGATTATGCAGTTATAGATCAAGGTCTATTCATAGCATGA 1770 0.4282 MDNGCFSSPRRDVFPAGLRVLVVDDDPTWLRILEKMLKKCSYEVTTCCLARHALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRIHEAREFESLEGFESIHLMRNGSEQSDDGNLFAVEDMTSTKKRKDADNKHDDRELVDSSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQKENDQKSPSSGMKHSDLPLKDLASFGVENSENKQHNDVSTDSYSYSEGTLQLHHMEAKVHEVDPKGIVSQPTTTTEKGRSFTVNNSTDTKIGKSLHMGLNQPFDPLESEGNHASVLDCTMPTRYSWAEVPEMQLKEHKSLVQLDDSFGRFPLHGKQHHIQVDHQSQSIGSINSNPSLTEEDVAACIETKPLYADYKREYNSSVSSIGSAAVDTFPIEPGSLVMNDQSSEPISTPNLGLKTQTSNLSCISDMEFYQRSLLLGGDTGAPAPASLPPLDDDLHFCWVQGECSNMNFNLQNMSGCYDPGLIAEIPTHYYDSADYAVIDQGLFIA* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2184 589 Pfam Myb-like DNA-binding domain 202 252 IPR001005 -
Aev04g2184 589 Gene3D - 18 148 - -
Aev04g2184 589 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 566 IPR045279 GO:0009736
Aev04g2184 589 SMART REC_2 18 130 IPR001789 GO:0000160
Aev04g2184 589 CDD REC_typeB_ARR-like 20 134 - -
Aev04g2184 589 SUPERFAMILY Homeodomain-like 198 257 IPR009057 -
Aev04g2184 589 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 566 - -
Aev04g2184 589 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
Aev04g2184 589 PIRSF RR_ARR_type-B 2 560 IPR017053 GO:0003677|GO:0003700|GO:0009736
Aev04g2184 589 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 200 253 IPR006447 GO:0003677
Aev04g2184 589 MobiDBLite consensus disorder prediction 327 353 - -
Aev04g2184 589 Pfam Response regulator receiver domain 20 129 IPR001789 GO:0000160
Aev04g2184 589 SUPERFAMILY CheY-like 17 149 IPR011006 -
Aev04g2184 589 Gene3D - 196 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2184 Aev-Chr4 20212967 20217498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2184 12 472 Response Regulator Gene Family AT2G25180 37.427 1.58e-84 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Aev04g2184 Response_reg 2.8e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2184 - K14491 gmx:100797421 902.894