Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2030 ATGGCTACCACTTATCTGATGATTAAGGATATTAATGATTCACTTGATAAGATTTTGATGCTAAAGGTTAGAATTCTTCGTTTGTGGAGAGTTAGCTCTTTTCAGATGGTAAAAGTAAAACCGATGCTCGAGATGGTGCTTATGGATGATCAGTCTAATCAAATTGGTTGCACGATTCGAAATGCACAACTCTCAATCTTTGAGCAACAACTGATGGAAGGCAAAGTTTATACCATAACGAATCTGACCATCTCAAAAAATGTGCAACACTACCAACCAACTACTCATGAATTTCGCCTTTTCTTCACTAATGCCACAAAAGTCAGACAAGTAGAGAACCAAACAATCCCGATTAATTGCTTCAAATTTGTGCCTAGTAGTGTTATTTTATCCGAAGTGAAGGAGGATAGGCCATTGCTTGATGTTATGGGGTTGCTTACCGGAAAGAGTAGAGTGCAGCAATTTAGAAGTAATGATTTCATTGTCCTTCAATTGGATGATTTGGAGGGAAGTGGTCCAATTCGTTGCACTTTATGGGAAGAGTTTGCTCATCAATTTGTTGCACATCTTAGAGATCATCTCGCAGCTCAATATATTGTGATTTTACAACTAGCCAAGTTAAAGATTTATGGTGGGGTGATGGGAGTGTCCAATGCAAATTGTACTTCCAAACATTTCATCAATGCTGAAATTTCAGAGTCAATTCAATTTCATGAAAGGCTTTCTACAAGTGGTGTTCCATCTATCTCTCAAGTGGCTCAAATAGAAAATGGTCCTACTTATTCCATAGAAGATGATCTTTTAAACAAAAATATTTTCAAGACATTAGAAGATTTAAAAGATGAAATTAGTGAGAAAGCAACCTATGTCACTATGGGAACCGTAGTAGAAATTGAGAATGAGGGTAATTGGTGGTACCGAGGATGTAAAAAGTGTTTTCAAGGTATGCAAAAGTATTCTGACAATTTTTATTGTAAGAAATGCAACACTACAGCAACAACATTTACCCCAAGAGAGGCTGCAAACTTCCTCAAGATCTCATCTTCTGATTTGAGGGCTTCTCATGTATCACGGGGTGGACATCAAAATCAATATCCTGAGGAGATTAATTCTTTCAAGGGCAAGAAGTTAATTTTTAAGGAAAGCTTTTCTGAAACATGTGAAAATGATCCATATTCTGAAGGACCATTGTTACAAACTCCTTCAAAGCAATCATGTAGTGATGCGGTTTGGGTTGCAAAAGCCACTGGGACAAGTATAACAAGATTGGAAGCTACAATAAGCAACCCACTTGAAGGGTCAAGTGCACAAGTGATCCCACAACCCTCATATACCCTTTTGAGATTACAAAAGGGCAAATCTGTGGTCCAAAATTCAGAAATAGATTACATCTCAGACCATTCAAGCAATCAAAAATCAAACTCTGATTCATATGAACGCAACTTATCAGACCCTCATGGTGATTACGAAGTGCTTGATGTCTTCGATGATTCATTTCTACATGAAGATGATGAATTTGACCCATTTGAATATATCTCGGATAATGAAGGCGAATGTGAAGTAGAGGAAGATG 1573 0.3732 MATTYLMIKDINDSLDKILMLKVRILRLWRVSSFQMVKVKPMLEMVLMDDQSNQIGCTIRNAQLSIFEQQLMEGKVYTITNLTISKNVQHYQPTTHEFRLFFTNATKVRQVENQTIPINCFKFVPSSVILSEVKEDRPLLDVMGLLTGKSRVQQFRSNDFIVLQLDDLEGSGPIRCTLWEEFAHQFVAHLRDHLAAQYIVILQLAKLKIYGGVMGVSNANCTSKHFINAEISESIQFHERLSTSGVPSISQVAQIENGPTYSIEDDLLNKNIFKTLEDLKDEISEKATYVTMGTVVEIENEGNWWYRGCKKCFQGMQKYSDNFYCKKCNTTATTFTPREAANFLKISSSDLRASHVSRGGHQNQYPEEINSFKGKKLIFKESFSETCENDPYSEGPLLQTPSKQSCSDAVWVAKATGTSITRLEATISNPLEGSSAQVIPQPSYTLLRLQKGKSVVQNSEIDYISDHSSNQKSNSDSYERNLSDPHGDYEVLDVFDDSFLHEDDEFDPFEYISDNEGECEVEED 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2030 524 Gene3D - 115 247 IPR012340 -
Aev04g2030 524 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 19 338 - -
Aev04g2030 524 CDD RPA1_DBD_B_like 141 233 - -
Aev04g2030 524 Gene3D - 265 340 IPR012340 -
Aev04g2030 524 SUPERFAMILY Nucleic acid-binding proteins 274 386 IPR012340 -
Aev04g2030 524 MobiDBLite consensus disorder prediction 466 487 - -
Aev04g2030 524 Pfam Domain of unknown function DUF223 44 132 IPR003871 -
Aev04g2030 524 Gene3D - 5 113 IPR012340 -
Aev04g2030 524 PANTHER REPLICATION FACTOR A 1, RFA1 19 338 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aev04g2030 524 SUPERFAMILY Nucleic acid-binding proteins 136 245 IPR012340 -
Aev04g2030 524 SUPERFAMILY Nucleic acid-binding proteins 6 113 IPR012340 -
Aev04g2030 524 CDD RPA1_DBD_A_like 20 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2030 Aev-Chr4 17713500 17719613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2030 47 328 Core DNA Replication Machinery Family AT5G08020 23.311 4.59e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2030 - - ahf:112707100 344.739