Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1926 ATGTCGAGTTCATCGGAGTATTCTGAATTCTCCGGCCAAAAACCGGCGAGGTCGCCGGAAAAATCGAGCTTCTCTCAGACTTGTAATCTGTTGAGTCAATACATCAAGGAAAAGGGTAGCTTCGGAGATCTTACCCTCGGAATCACATGCAACAACAACTCCGAACCAAATGGGTCATCTGAGACATCTTGTCAATCTGCAACAACCATGAACCTGTTTCCTACCAAAGAAAGCAACGTTGCACCAAAGAACCTTACAGCTATGGATTTGCTCTCTCCAACTTTGATCAATTCTAGTGCAATTAAGTCAGTGAGCAAGGGGCCGAAGGCTGCACAATTGACAATCTTTTACAACGGTCAAGTTATTGTGTTCGATGATTTTCCGGCCGAAAAAGCGACTGAGCTTATGTCCTTTGCTAGCAATGGAATCTCACAGAGCCAGAGCCAGAACAACTCTGTCTACACTTACACTCAGAGCCAGCCCCCTTTTCCTCCGAGTTTGGCCAGAACATCTGCTGATTCAAGCGCTCAGACTTTTCCCAGCATGAATATCGTCCCCAGCACTGGCGTCAGTTCGATTCACGAGCACGCTATAGCAGCCCCGTCGAGGCCTGTTGTTTGTGATCTGCCAATTGCTAGAAAAGCTTCACTTCATCGGTTCCTGGAGAAGAGAAAGGATAGAATCGCTTCCAAAGCCCCATATCAAGCACCAAATTCCGTGGGGGCCGCTAATAAACCTGTTGAATCCATGGCATGGCTAGGGTTAGGTGCTAAGTCACAAAATTAA 786 0.4695 MSSSSEYSEFSGQKPARSPEKSSFSQTCNLLSQYIKEKGSFGDLTLGITCNNNSEPNGSSETSCQSATTMNLFPTKESNVAPKNLTAMDLLSPTLINSSAIKSVSKGPKAAQLTIFYNGQVIVFDDFPAEKATELMSFASNGISQSQSQNNSVYTYTQSQPPFPPSLARTSADSSAQTFPSMNIVPSTGVSSIHEHAIAAPSRPVVCDLPIARKASLHRFLEKRKDRIASKAPYQAPNSVGAANKPVESMAWLGLGAKSQN* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1926 261 ProSiteProfiles Tify domain profile. 106 141 IPR010399 -
Aev04g1926 261 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 256 IPR040390 -
Aev04g1926 261 Pfam Jas motif 210 235 IPR018467 -
Aev04g1926 261 SMART tify_2 106 141 IPR010399 -
Aev04g1926 261 Pfam tify domain 108 140 IPR010399 -
Aev04g1926 261 MobiDBLite consensus disorder prediction 1 23 - -
Aev04g1926 261 PANTHER PROTEIN TIFY 10A 17 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1926 Aev-Chr4 16054527 16057528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1926 1 258 Tify Gene Family AT1G19180 40.925 1.68e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aev04g1926 tify 1.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1926 K13464 - gmx:100801449 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1926 04 16054527 16057528 Aev04g1926 04 16054527 16057528 ECH
Aev01g2744 01 30072781 30074292 Aev04g1926 04 16054527 16057528 PCT