Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1923 ATGGCCGCTGTTCGCTCTAACCACCATCTTCTTCTTCTTCTCTTCCTCTTCACCTCTCTCTCTCTCTCCCTCCTCCCACAACCGTCTCTCTCCGTCGTTCTCCCTTCAGAAATCCAAGCTTTGTTAAAGCTTAAACAATCCATCACCAATGCTGATCGCACATTGCCCTCATGGGTCCCTAATGTCTCCCCTTGCGGTAACTGGGCCGGCGTCATATGCTTCAACGACATTATAACGGGCCTTCACCTCTCCGACATGGGCCTAACAGGAACCATCGATGTCGATTCCCTTACCCAAATTCGCGGGCTTAGAACAATAAGCTTCGTCAACAACTCATTCGCAGGCCCAATACCCGAATTTCACAAGCTCGGAGCAATAAAAGCCCTCTTGCTAAGCATGAACCAATTCTCCGGGCCCATCCGTTCTGATTTCTTCAACCAATTGGGCTCGCTCAAGAAATTGTGGATAGACAATAACAATTTCTCAGGGAACATACCCGATTCCGTGGCGGGCCTCGATCTATTGAAGGAGCTTCACCTCGAGAAGAACCAATTCTCGGGCCTGATTCCGAATTTGGGGCAAGATCTGACATCGTTCGATGTGTCGAATAACAATCTCGAAGGAGCCATACCCGATGGGCTTTCGAAGAAGTTCGGTGCGGAGGCTTTTGGTGGGAACCCGAATCTGTGCGGGAAGCCGTTGGAGAAATCGTGTGACGGTTACACGTTACCGTCATTTGGGGGAAACGGTGACGGAACGAGTTGGGGAGTGAAGGTGATGATGATTCTGTTATGCACCGTTATAATCGCCGTTATCCTTGTGCTCGTGAAGTCGAGGCAGCAGAGGAAGAATAGTGAAGTGGGCGTGATGGGGAGAATGTACAGCACGGAATCGGTGGTGCAGGTGCACGTGCCTAGCTCGAACCACCACAGGGTTGCTCCGGAGCCCGATAGCGAAGCTGCCTCCGGGAGCAAGAAGGGCGGCGGCGGCGGCGGCGGTGGGGAGTCGAGGAGGGGGAGGAGCGGGAGTAATGGGATCGGGGACATAGTGATGGTGAATGATGAGAAGGGGGTGTTTGGGATGCAGGATCTGATGAAGGCGGCGGCGGAGGTGCTGGGGAACGGGGGGCTGGGGTCGGCGTACAAGGCGGCGATGGCGAACGGGCTGTCGGTGGTGGTGAAGAGGATGAGGGAGCTGAACAAGGTGGGGAAGGACGTGTTCGACGCGGAGATGAGGCAGTTTGGGAGGCTGAGGCACAGTAACATAATGGCGCCTTTGGCTTACCATTACAGGAGAGAGGAGAAGCTCTTTGTCACTGAATACATGCCCAAAGGAAGCTTGTTGTATGTCTTGCACGGTGACAGAGGAACAAACCATGCTGGGCTGAATTGGCCTACGAGATTGAAGATTGTGAAGGGAATTGGAAGAGGATTAGGGTTCCTGTACACAGAATTCTCCACCTATGATCTTCCCCATGGAAACCTGAAATCCAGCAATGTCCTACTAACAGAAGATTATGAGCCTCTCCTAAGTGACTTTGCCTTTCATCCACTGATCACCCCAACAGCTGCAATGCAAGCAATGTTTGCATTCAAGTCCCCAGATTTCATACAATACCAGAAAATCTCTCAGAAGACCGACGTCTATTGCCTCGGAATCATAATCCTTGAGATCATCACAGGGAAGTTCCCTTCTCAGTACCACAGCAATGGAAAAGGTGGCACTGATGTTGTTCAGTGGGTGCTCACTGCAATATCTGAGAGAAGAGAGGCAGAACTCATTGATCCAGAGTTGCAAGATGAGGCAAGGAATTCGCTAAACCAGATGCTGCAACTTGTTCAACTTGGGGCTGCTTGCACTGAGAGCAACCCTGAACAGAGACTTAGCATGAAGGAAGCAATTAGAAGGATAGAGGAGTTACGTGTTTAA 1929 0.5137 MAAVRSNHHLLLLLFLFTSLSLSLLPQPSLSVVLPSEIQALLKLKQSITNADRTLPSWVPNVSPCGNWAGVICFNDIITGLHLSDMGLTGTIDVDSLTQIRGLRTISFVNNSFAGPIPEFHKLGAIKALLLSMNQFSGPIRSDFFNQLGSLKKLWIDNNNFSGNIPDSVAGLDLLKELHLEKNQFSGLIPNLGQDLTSFDVSNNNLEGAIPDGLSKKFGAEAFGGNPNLCGKPLEKSCDGYTLPSFGGNGDGTSWGVKVMMILLCTVIIAVILVLVKSRQQRKNSEVGVMGRMYSTESVVQVHVPSSNHHRVAPEPDSEAASGSKKGGGGGGGGESRRGRSGSNGIGDIVMVNDEKGVFGMQDLMKAAAEVLGNGGLGSAYKAAMANGLSVVVKRMRELNKVGKDVFDAEMRQFGRLRHSNIMAPLAYHYRREEKLFVTEYMPKGSLLYVLHGDRGTNHAGLNWPTRLKIVKGIGRGLGFLYTEFSTYDLPHGNLKSSNVLLTEDYEPLLSDFAFHPLITPTAAMQAMFAFKSPDFIQYQKISQKTDVYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVLTAISERREAELIDPELQDEARNSLNQMLQLVQLGAACTESNPEQRLSMKEAIRRIEELRV* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1923 642 Gene3D Ribonuclease Inhibitor 36 192 IPR032675 -
Aev04g1923 642 Gene3D Phosphorylase Kinase; domain 1 340 441 - -
Aev04g1923 642 Pfam Protein kinase domain 370 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g1923 642 Gene3D Transferase(Phosphotransferase) domain 1 442 642 - -
Aev04g1923 642 PANTHER LRR RECEPTOR-LIKE KINASE 7 641 - -
Aev04g1923 642 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 641 - -
Aev04g1923 642 SUPERFAMILY L domain-like 34 217 - -
Aev04g1923 642 CDD STKc_IRAK 372 640 - -
Aev04g1923 642 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Aev04g1923 642 ProSiteProfiles Protein kinase domain profile. 366 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g1923 642 SUPERFAMILY Protein kinase-like (PK-like) 370 637 IPR011009 -
Aev04g1923 642 MobiDBLite consensus disorder prediction 303 348 - -
Aev04g1923 642 Gene3D Ribonuclease Inhibitor 196 236 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1923 Aev-Chr4 16020521 16023835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1923 10 640 Receptor kinase-like Gene Family AT3G42880 49.765 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aev04g1923 Pkinase 2.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1923 - - ahf:112738359 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1923 04 16020521 16023835 Aev04g1923 04 16020521 16023835 ECH
Aev01g2742 01 30056685 30058753 Aev04g1923 04 16020521 16023835 PCT