Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1908 ATGCAGAGGAAATCGCCGTTACCGTTGAGCGAGGAAAACAGTGGAAATGCGAACAAGAAGAAGAAGCTTCTGTGCGGCAAGGAAGCATTGGTGAAGCTTCTGAGATGGCATTTTGGGTACCCTGATTTTAGGGGCAAGCAGTTGGTTGCTATTCAGGCCGTGCTCTCAGGAAGAGATTGCTTTTGTCTTATGCCAACTGGAGGAGGCAAGTCGATGTGTTATCAGATCCCTGCATTGGCCAAAGCAGGAATTGTGCTTGTTGTTTGTCCTTTAATAGGACAACAATTGTTATTTCTGACTTTTTGTTCTCTGCTGGCAGCCTTAATGGAAAACCAAGTAATGGCACTAAAGGAGAAAGGCATTACTGCGGATTTTCTCTCCTCAACAATAACTGCTGATGCAAAAAATAAGATTCATGAGGATCTTGATTCTGGAAAACCCTCTACCAAGCTGCTATACGTGACACCAGAGTTGATAGCAACAGCAGGATTTATGTCAAAGCTGAAAAAGATTTATGCTAGGGGTTTGCTAAGTCTCATTGCCATTGATGAGGCACATTGCATCTCAAGTTGGGGCCATGATTTCAGACCTAGCTACCGGAAGCTCTCATCATTGAGAAGCCACCTACCAGATGTACCAATGTTAGCTCTGACTGCCACTGCAGCTCCTAAGGTTCAGAAGGATGTGGTAGAGTCTTTGCATATGCAAAATCCATTAATACTTAAATCTTCTTTTAATCGTCCTAATATATATTATGAAGTTCGATACAAAGATCTTTTGGATGACCCTTACTCTGATTTATCTACTACACTCAACTCTATGGGAGATGTTTGTGCAATAGTTTACTGCCTTGAGCGTTCAATGTGTGATGAATTATCTGCTCATCTATCCCAAAATGGCATTTCCTGTGCTGCTTATCATGCAGGATTGAATAAGAATCTCCGAACCTCTGTGTTAGATGATTGGATTTCTTCTAAGATACAAGTTGTTGTTGCCACTGTTGCTTTTGGGTATGGCATTGATAGAAAGGATGTCAGAATTGTATGCCACTTCAATATTCCTAAGTCAATGGAATCATTTTATCAAGAATCAGGCAGAGCTGGTCGTGATCAACTATCCTGTAAAAGTCTTCTGTACTATGGGGTAGATGATCGCAAAAGAATGGAATTCATATTAAGGAACTCTGGAAGCAAGAAGGTTCAGTCATCAAGTTCACAAGAAGAATCATCAAGGTCACTGACTGACTTCAATCAGATGGTTGAATATTGTGAAGGATCTGGATGTCGTAGAAAAAGGATTCTCGAGAGCTTTGGGGAGCAGGTTCCTGCATCACTATGTGGGAAAACGTGTGATGCCTGCAAACATCCAAATTTAGTCGCTAGATATTTGGAGGACCTGGTGTCTGCCATTGCTATACGCCATAAAGGTGGTTCTGCTCGCATTTTCATCACCAGTTCTAGTGACACAATTGATAGAGAACAGTTATCTGAATTCTGGAATCGTGGTGATGAAGAAAGTGGACCAGAGGAAGATATATCTGACTCAGATGATGGTAATGAGGTAGTCTACAACTTATCCAAGTCAAAGCTTCAATCCAGATTGGGAGTAAATGAAAAGCTTGCTGTGTTACAACGTGCAGAAGAAAACTTCTATCGAAAGGAGAATGCCGATAAACAGAGCAAAGCTGATAAGAATGCTATTTCTGATACCATGCGAGGAACAAGCAGACAAAGATTACAAAATGCTCTAAAACAGGCTCAGCAACGACTTGATGACTTAAAGATTGACATGGAAGCATCAGTATCTTTCCTTGAAGATGAATGCTACAAGAAATATAGCAAGGCGGGCAAATCATTCTATTATTCACAAGTGGCAAGCACTGTAAGGTGGCTGACAACTGCAAATTCTGTCGATCTGATGAACCGACTTGGTGCAATGGAGGCATCCACATCAATGAAGGTCGTGTCAGAGGCTGAACATCCCCTCACCCCGAAACATGCTTTAGATGCTTGTGCAAAAGAAGATACAATCAATGAACTCTCAGGCAATGATAGACCAGAAAATTCTCCATGTGGTGACAGTATTCTGCCAATTGAAAGTTCTTCCTTTAGTACAAAGTTGCCACAGATACCATCCTTCTCTGAATTTGTTAATAGCAGGAAAACAAAAGATGACCAATTAAACGACACAAAAAAACACTCAAGAGTAGAAAAGAAGATGAGACTAGAGTAG 2232 0.4113 MQRKSPLPLSEENSGNANKKKKLLCGKEALVKLLRWHFGYPDFRGKQLVAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKAGIVLVVCPLIGQQLLFLTFCSLLAALMENQVMALKEKGITADFLSSTITADAKNKIHEDLDSGKPSTKLLYVTPELIATAGFMSKLKKIYARGLLSLIAIDEAHCISSWGHDFRPSYRKLSSLRSHLPDVPMLALTATAAPKVQKDVVESLHMQNPLILKSSFNRPNIYYEVRYKDLLDDPYSDLSTTLNSMGDVCAIVYCLERSMCDELSAHLSQNGISCAAYHAGLNKNLRTSVLDDWISSKIQVVVATVAFGYGIDRKDVRIVCHFNIPKSMESFYQESGRAGRDQLSCKSLLYYGVDDRKRMEFILRNSGSKKVQSSSSQEESSRSLTDFNQMVEYCEGSGCRRKRILESFGEQVPASLCGKTCDACKHPNLVARYLEDLVSAIAIRHKGGSARIFITSSSDTIDREQLSEFWNRGDEESGPEEDISDSDDGNEVVYNLSKSKLQSRLGVNEKLAVLQRAEENFYRKENADKQSKADKNAISDTMRGTSRQRLQNALKQAQQRLDDLKIDMEASVSFLEDECYKKYSKAGKSFYYSQVASTVRWLTTANSVDLMNRLGAMEASTSMKVVSEAEHPLTPKHALDACAKEDTINELSGNDRPENSPCGDSILPIESSSFSTKLPQIPSFSEFVNSRKTKDDQLNDTKKHSRVEKKMRLE* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1908 743 MobiDBLite consensus disorder prediction 718 743 - -
Aev04g1908 743 Coils Coil 576 596 - -
Aev04g1908 743 CDD SF2_C_RecQ 247 380 - -
Aev04g1908 743 Pfam DEAD/DEAH box helicase 47 227 IPR011545 GO:0003676|GO:0005524
Aev04g1908 743 MobiDBLite consensus disorder prediction 682 697 - -
Aev04g1908 743 PANTHER DNA HELICASE RECQ FAMILY MEMBER 4 728 - -
Aev04g1908 743 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE 3 4 728 - -
Aev04g1908 743 MobiDBLite consensus disorder prediction 678 697 - -
Aev04g1908 743 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 51 239 IPR014001 -
Aev04g1908 743 Pfam Helicase conserved C-terminal domain 277 369 IPR001650 -
Aev04g1908 743 MobiDBLite consensus disorder prediction 714 743 - -
Aev04g1908 743 Pfam RecQ zinc-binding 384 454 IPR032284 -
Aev04g1908 743 SMART helicmild6 290 371 IPR001650 -
Aev04g1908 743 Gene3D - 247 471 IPR027417 -
Aev04g1908 743 Gene3D - 7 246 IPR027417 -
Aev04g1908 743 MobiDBLite consensus disorder prediction 498 518 - -
Aev04g1908 743 MobiDBLite consensus disorder prediction 554 575 - -
Aev04g1908 743 CDD DEXHc_RecQ 32 246 - -
Aev04g1908 743 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 33 455 IPR004589 GO:0004386|GO:0006310
Aev04g1908 743 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 392 IPR027417 -
Aev04g1908 743 SMART ultradead3 39 255 IPR014001 -
Aev04g1908 743 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 270 411 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1908 Aev-Chr4 15870051 15878744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1908 36 369 Eukaryotic Initiation Factors Gene Family AT3G19760 22.000 3.71e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1908 - K10901 gmx:100819601 1108.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1908 04 15870051 15878744 Aev04g1908 04 15870051 15878744 ECH