Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1882 ATGAACAACAACGATGTAACCTTGGACTTCGAAAACCTCAAAGTGGTCACCGCCGTGGGACGCGGTGCCAAGGGTGTGGTGTTCTTGGCAAGAACCTGCAGCGACGGGTCCAATGAGCAGTGGCTGGCCTTGAAGTTGATCTCGAAAGCCGCAATTCAGAAGAAGAATAAGATCAGCGGCCATTGCAAGAGGGTCTCGTTTGAACAACAAATATTGCGCTGTTTTGATCACCCTCTCTTGCCACGGTTGCGAGGGGTCTTGGAGACTAAGGAGCTCTATGGGTTTGCAATAGATTATTGCCACGGCGGGACCATGCATTCTCTCAGGAGGAGGCAATATGATAAGACGTTCTCTAATGATGCCATAAGGTTTTACGCGGTTGAATTGGTCCTATCATTAGAGTATTTGCACAATCTCGGAGTGGTATACAGGGATCTGAAGCCAGAGAACATCCTAATACAAGAAACGGGTCACATAATGCTGGTGGACTTCGACCTTTCCAAGAGGCTGAACCCAAAGTCACCGCAATCACTGAGTGCCAACACATCGCCGAGTTCTAACATGGCGTCACTTGCGGCGAAGTGTCGGAGGAAGCGACTGCTATCACGGTTGTGTTACTGTCACTCGGGTGTCATCCCTTACGACACGGAAACTCCACTCAGCACCAACTCGCCGCCGCGTCAGAGCGACTCAGACTCAGTGGAAAAGTCCAATTCATTTGTGGGAACAGAGGATTACGTGGCACCAGAGGTTATATTGGGGGAAGGACACGAGTTCAGTGTTGATTGGTGGTCATTAGGCGTTGTTTTGTATGAGATGTACTACGGAACGACGCCGTTTAAGGGTGCCAATAGGAAAGAAACATTTCAACGAATTTTAACTAAGGAACCAGATCTAAAGGGTGAAACGACGCCGTTAAAGGGCCTGATTCTGAAGTTGCTTGAAAAGGATCCTAACCGTAGGATCGTAGTAAATGAAATCAAGCACCATGATTTCTTTAAGGGTGTGAAGTGGGACACAATTTTGCAAATTGCGCGTCCACCACATATTCCTAATAATGAAATCGAGGACAGAGCAAAGTTTTCCTTACAAGCTGTGGAGTCTTTTGTCCATGGAATATTTTTCCCAAAGAATAATAATGAGGGAGAGAAAAGCAAACAGGCTGATGAAAAGAAGAATGCGGAGAAAAAGAACGGTGAAGAAGTAAATAGTGTTCTGGTCCTTTCCGAGCACTTGGCCGACCGAGCACTTGGCCGACGTCAAATGCCAGAAGTCCGAACACAAGAGGAAGAATAA 1296 0.4707 MNNNDVTLDFENLKVVTAVGRGAKGVVFLARTCSDGSNEQWLALKLISKAAIQKKNKISGHCKRVSFEQQILRCFDHPLLPRLRGVLETKELYGFAIDYCHGGTMHSLRRRQYDKTFSNDAIRFYAVELVLSLEYLHNLGVVYRDLKPENILIQETGHIMLVDFDLSKRLNPKSPQSLSANTSPSSNMASLAAKCRRKRLLSRLCYCHSGVIPYDTETPLSTNSPPRQSDSDSVEKSNSFVGTEDYVAPEVILGEGHEFSVDWWSLGVVLYEMYYGTTPFKGANRKETFQRILTKEPDLKGETTPLKGLILKLLEKDPNRRIVVNEIKHHDFFKGVKWDTILQIARPPHIPNNEIEDRAKFSLQAVESFVHGIFFPKNNNEGEKSKQADEKKNAEKKNGEEVNSVLVLSEHLADRALGRRQMPEVRTQEEE* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1882 431 Coils Coil 377 397 - -
Aev04g1882 431 ProSiteProfiles Protein kinase domain profile. 13 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g1882 431 SMART serkin_6 13 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g1882 431 Gene3D Phosphorylase Kinase; domain 1 13 103 - -
Aev04g1882 431 MobiDBLite consensus disorder prediction 217 238 - -
Aev04g1882 431 Gene3D Transferase(Phosphotransferase) domain 1 104 174 - -
Aev04g1882 431 Gene3D Transferase(Phosphotransferase) domain 1 234 352 - -
Aev04g1882 431 PANTHER FLIPPASE KINASE 1-RELATED 5 397 - -
Aev04g1882 431 SUPERFAMILY Protein kinase-like (PK-like) 11 362 IPR011009 -
Aev04g1882 431 MobiDBLite consensus disorder prediction 382 399 - -
Aev04g1882 431 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 5 397 - -
Aev04g1882 431 Pfam Protein kinase domain 235 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g1882 431 Pfam Protein kinase domain 15 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g1882 431 MobiDBLite consensus disorder prediction 377 406 - -
Aev04g1882 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1882 Aev-Chr4 15552543 15556057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1882 7 374 AGC Kinase Gene Family AT4G13000 53.930 2.25e-135 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aev04g1882 Pkinase 7.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1882 K20714 - gmx:100813693 525.013