Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1839 ATGCCTTCTCATTCTGTTCCACCTACCATGCCTACCATCCCTCTTACCGTCGTTGGATACACCACCACCACAACCCAACCTAAACCCTCACCGTCACATAGCCTCAGCCAAACCTTGACCCTGACGGTTACGGTTCTCGCCGTCGCCGTCGCCGTCTTATTTGCTCTCTACTTCCTTCTTCGTTACTTCCGCCGTCATCACTCTCCACCAACAGCTGCTCCCGCCGCGGTGTTCTCCTCCGGCAGCCGAATATCGCCGGAGATTGCCGCGCCTTCCTCCATCGACTCACTACCGCTGTTCGCTTTCTCCTCAGTCACACGCCGCTCCGCCGCCTACGGCGGCGGCGGCGACTGCGCCGTTTGCCTTTCGAGGTTCGAGCAGCGCGACCTCCTCCGCCTCCTCCCTCTCTGCTGCCACGCCTTCCACGCCGAATGCATCGACACGTGGCTCCGATCAAACCTCACGTGTCCGCTCTGCCGATCCGCCGTCTTTGCGTCGAATTCCGACGTTGCGAAGATTCTCCGGTCGTCGTCCTCCGCTGCCGGAGACAGCTTCCGCCTCGAGATAGGTAGCATCAGCCGCCGCGGAATTTCTTCCTCCGCCGCCGGAGAAACGCGCGCGAGGAGCTATTCGGTTGGCGAGTTCGACTACCTAGTCGATGACGTCAACGCTGAGATTCCGTTAAGTCAAGCTTGCCGGAGAATCGATTCGAGCGAGAAGGAAGATTCTGCGGCGCTGGAGCCACCGGCGGCGATCTTGGCCGGCGAAGTAGCAAGCGGAAGGACATTGAAGGATTATTATGATTTGGTTTCTGCTTCAATATCGTCGACGATGTCGTTTCGAAGCTCAGGAAGGTTCTTCAGTGGGAGTAGTAGGCGAAACGACATCGTTCCGGTGGGAGATTACGATGTGGAAGCCAACCGTTTTGGGGAAGAAATCAGTGAAATGTTTCGATGGTTCTCAAATATGGCATAG 975 0.5733 MPSHSVPPTMPTIPLTVVGYTTTTTQPKPSPSHSLSQTLTLTVTVLAVAVAVLFALYFLLRYFRRHHSPPTAAPAAVFSSGSRISPEIAAPSSIDSLPLFAFSSVTRRSAAYGGGGDCAVCLSRFEQRDLLRLLPLCCHAFHAECIDTWLRSNLTCPLCRSAVFASNSDVAKILRSSSSAAGDSFRLEIGSISRRGISSSAAGETRARSYSVGEFDYLVDDVNAEIPLSQACRRIDSSEKEDSAALEPPAAILAGEVASGRTLKDYYDLVSASISSTMSFRSSGRFFSGSSRRNDIVPVGDYDVEANRFGEEISEMFRWFSNMA* 325
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1839 324 Pfam Ring finger domain 117 160 IPR001841 -
Aev04g1839 324 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 15 311 - -
Aev04g1839 324 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 15 311 - -
Aev04g1839 324 CDD mRING-H2-C3H2C2D_ZSWM2 118 160 - -
Aev04g1839 324 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 169 IPR013083 -
Aev04g1839 324 SMART ring_2 118 159 IPR001841 -
Aev04g1839 324 SUPERFAMILY RING/U-box 106 165 - -
Aev04g1839 324 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aev04g1839 Aev-Chr4 14779388 14780362 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1839 43 259 C3H Transcription Factor Family AT5G17600 30.833 4.94e-22 93.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1839 K10663 - gmx:100804962 287.73