Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1815 ATGAGTCTCGTAGCAGGTTCATACGAGAGGTTCATCTGGGGCTTCACCCTAAAGCCCCAAAACGAAACCCTAATCCTAACCCCTCTCTTCTCCTACCCTTCCCACCTCTCCCTCATCAAGTGCGTCGCCGTCTCCGGCTCCGTCGTGGCCTCCGGCGGCGCCGACGACACTATCCACCTCTACGACCTCTCCTCCGCCGCTTCCCTCGGCTCACTCCACCAGCACTCCGCTACCGTCACCGCCCTCTCCTTCTACGCCCCTCCTTCCCTTCCCTTCCCACGCAACCTCCTCTCCGCCGACGCCGATGGCTCCCTCTCCCTCTTCGACGCAGACGGTTTCGTCCACCTCAAGACCCTCCCCTCCGTTCACCGCCGCGCCGTCAACGACCTCGCCCTCCACCCGTCCGGCAAGCTCGCGCTCTCCGTCGGCCGTGATGAGTGCCTCGCCATGGTCAACCTCGTTCGGGGGCGGAGGAGTTTCTGCTGCCGACTCGGCAAGGAGGCAAGCGTCGTGAGGTACGACTCCGCCGGGGACAGGTTCTTCATGGCCATGGATGACAAGGTAACCGTGCACGAGGCTGAGGACGCGCGCTTGCTATTCGAATTGGAGTGCCAGAAACGTGTTCTCTGCGCCGCCACAGCCGAGAATGGACTTCTATATACAGGGGGTGAGGACCGAAATATAACTGCATGGGACATAAAAAGTGGAAAGGTGGCATATTGCATGGAAGGAGCGCATAATGCTCGCGTAAAAGGTATTGTTGTGCTCACAGATGGTGATGGTACTGCTGGGAGTGAAGACCCATACCTAGTTGCATCTGCCTCGTCTGACGGTGTTATTCGTGTTTGGGATGTCCGAATGGCCGCCACAGAGAAGTCAGAACCAGTAACTGAGTGTAAGACACAATCAAGGCTGACTTGCCTTGCTGGGTCATCACTAAAATTGAGACGCACTAGTGCTGGAAAAAGTAATAAAAAGGGACAGGATCAAACAATGGAAGGCTCGGTAATTCCTCTGTTGTGGTCTATTCTTTTTCCTACCGCCGCGCCACCTCATCCCAGCAAAAGTGTCATCGCAATTCACACAACCCTCCTACTTGTTTGTCTCTGCCACCGCCTGCTCTCTCTTCGCGATCTGCAACCGCTTGCTCCTGCCACCGCTATCCATCGCACATCACACTCTTGCTTGTCTGCCCCTGCCACCGCGCCATCGCTCATCGCACATCAACATCACAGCGTCATCGCACCGCCATCTTCAACCGGCGACTTCTCCAGCCACCCTCCTGCTACCCGCGATCTGCAACCGGTGGTGACTGCAATCGCCTCTAGCTCTGTCTCGACCTCAATTTATGTTTGGAAATGCCTTGACGATGGGGAGTGA 1380 0.5681 MSLVAGSYERFIWGFTLKPQNETLILTPLFSYPSHLSLIKCVAVSGSVVASGGADDTIHLYDLSSAASLGSLHQHSATVTALSFYAPPSLPFPRNLLSADADGSLSLFDADGFVHLKTLPSVHRRAVNDLALHPSGKLALSVGRDECLAMVNLVRGRRSFCCRLGKEASVVRYDSAGDRFFMAMDDKVTVHEAEDARLLFELECQKRVLCAATAENGLLYTGGEDRNITAWDIKSGKVAYCMEGAHNARVKGIVVLTDGDGTAGSEDPYLVASASSDGVIRVWDVRMAATEKSEPVTECKTQSRLTCLAGSSLKLRRTSAGKSNKKGQDQTMEGSVIPLLWSILFPTAAPPHPSKSVIAIHTTLLLVCLCHRLLSLRDLQPLAPATAIHRTSHSCLSAPATAPSLIAHQHHSVIAPPSSTGDFSSHPPATRDLQPVVTAIASSSVSTSIYVWKCLDDGE* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1815 459 Pfam WD domain, G-beta repeat 28 62 IPR001680 GO:0005515
Aev04g1815 459 Pfam WD domain, G-beta repeat 265 284 IPR001680 GO:0005515
Aev04g1815 459 SMART WD40_4 112 152 IPR001680 GO:0005515
Aev04g1815 459 SMART WD40_4 235 284 IPR001680 GO:0005515
Aev04g1815 459 SMART WD40_4 195 232 IPR001680 GO:0005515
Aev04g1815 459 SMART WD40_4 65 109 IPR001680 GO:0005515
Aev04g1815 459 SMART WD40_4 25 62 IPR001680 GO:0005515
Aev04g1815 459 ProSiteProfiles Trp-Asp (WD) repeats profile. 265 293 IPR001680 GO:0005515
Aev04g1815 459 PRINTS G protein beta WD-40 repeat signature 219 233 IPR020472 -
Aev04g1815 459 PRINTS G protein beta WD-40 repeat signature 49 63 IPR020472 -
Aev04g1815 459 PRINTS G protein beta WD-40 repeat signature 271 285 IPR020472 -
Aev04g1815 459 SUPERFAMILY WD40 repeat-like 4 286 IPR036322 GO:0005515
Aev04g1815 459 ProSitePatterns Trp-Asp (WD) repeats signature. 271 285 IPR019775 -
Aev04g1815 459 Gene3D - 171 459 IPR015943 GO:0005515
Aev04g1815 459 ProSiteProfiles Trp-Asp (WD) repeats profile. 32 71 IPR001680 GO:0005515
Aev04g1815 459 PANTHER PAK1 INTERACTING PROTEIN 1 1 330 - -
Aev04g1815 459 Gene3D - 14 157 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1815 Aev-Chr4 14447571 14451033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1815 45 293 U-box Gene Family AT2G33340 25.100 5.15e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1815 K14830 - gmx:100777673 476.863